Protein Alignment nAChRalpha5 and LOC798522

DIOPT Version :9

• Sequence 1: NP_001356885.1
• Gene: nAChRalpha5 / 34826
• FlyBaseID: FBgn0028875
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: XP_001338964.6
• Gene: LOC798522 / 798522
• -ID: -
• Length: 488
• Species: Danio rerio
• Alignment Length: 524
• Identity: 175/524 - (33%)
• Similarity: 283/524 - (54%)
• Gaps: 61/524 - (11%)

  Fly   293 W--IFLLIYLNLS-AKVCLAGYHEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLMQIIDVDE 354
            |  :.||..|.|: |..|..|....:||:||::.|::..|||.:....|.::..:||.||.|:||
Zfish     7 WMEVMLLSALLLAEASHCAQGRFAHKLLNDLMEDYSSALRPVDDTDKSLNVTLQVTLSQIKDMDE 71

  Fly   355 KNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVV 419
            :||:|:..:|::..|:|.:|:|:..||.|::.:|||...||:||:::||.||:.|.|...||||:
Zfish    72 RNQVLIAYLWIRQVWHDAHLKWSKEDYDGLEVIRIPSSLIWRPDLVLYNKADDDFSGPVDTNVVL 136

  Fly   420 RNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDETGGDISSYVLNG 484
            |..|...:..|.|.||:|.:|:::||||.|:|.:.||||||:|.|:|:.: ....||:|.:|.|.
Zfish   137 RYTGEITWDAPAITKSSCVVDVSYFPFDSQQCNLTFGSWTYNGNQVDIAM-GSVSGDLSDFVENV 200

  Fly   485 EWELLGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMALLGFTLPPDSG 549
            |||..|:|..:|.|.|.||.:||.|||:.::::||:.:|..||::||.||:.:|.|.|.||.|||
Zfish   201 EWECHGMPATKNVIMYGCCSDPYPDITYTVLLQRRSSFYIINLLLPCFLISFLAPLSFYLPADSG 265

  Fly   550 EKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADT 614
            ||:|||||:||:||||..||||:|| .|::|||:..|:...|.|:.:|...||.|:|.|...|:.
Zfish   266 EKVSLGVTVLLALTVFQMMVAESMP-PSESVPLIAKYYIATMTMITASTALTIFIMNIHFCGAEA 329

  Fly   615 HEMSEWIRIVFLCWLPWILRMSRPGRPLILEFPTTPCSDT----SSERKHQILSDVELKERSSKS 675
            ..:..|.:::.:.::..|..:...|......|.....|::    :..|||::
Zfish   330 KPVPYWAKVLIIDYMSKIFFVYEVGESCASPFGQAEESESFHSQNHHRKHKL------------- 381

  Fly   676 LLANVLDIDDDFRHNCRPMTPGGTLPHNPAFYRTVYGQGDDGSIGPIGSTRMPDAVTHHTCIKSS 740
                         |:.:....|...|..|..:::.:..|.:                  :|:...
Zfish   382 -------------HHPKGKISGSPPPCCPEDHKSPFVLGCE------------------SCVYCG 415

  Fly   741 TEYELG------LILKEIRFITDQLRKDDECNDIANDWKFAAMVVDRLCLIIFTMFTILATIAVL 799
              :..|      .:|:.:.:|.:..|:.........:||..|.|:||..:.||.:...|.:|.::
Zfish   416 --FRSGNLACDTKLLRNVEYIANCFREQKTTALKVAEWKKVAKVMDRFFMWIFFIMVFLMSILII 478

  Fly   800 LSAP 803
            ..||
Zfish   479 GKAP 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nAChRalpha5	NP_001356885.1	LIC	313..802	CDD:273305	165/498 (33%)
LOC798522	XP_001338964.6	Neur_chan_LBD	32..477	CDD:332142	165/492 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D363540at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920