Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001017885.1 | Gene: | chrna5 / 550584 | ZFINID: | ZDB-GENE-050417-440 | Length: | 466 | Species: | Danio rerio |
Alignment Length: | 534 | Identity: | 188/534 - (35%) |
---|---|---|---|
Similarity: | 277/534 - (51%) | Gaps: | 99/534 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 292 SWIFLLIYLNLSAKVC-------LAGY--HEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLM 347
Fly 348 QIIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGT 412
Fly 413 YQTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDETGGDI 477
Fly 478 SSYVLNGEWELLGVPG----KRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMA 538
Fly 539 LLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTIL 603
Fly 604 ILNYHHRNADT-HEMSEWIRIVFLCWLPWILRMSRPGRPLILEFPTTPCSDTSSERKHQILSDVE 667
Fly 668 LKERSSKSLLANVLDIDDDFRHNCRPMTPGGTLPHNPAFYRTVYGQGDDGSIGPIGSTRMPDAVT 732
Fly 733 HHTCIKSSTEYELGLILKEIRFITDQLRKDDECNDIANDWKFAAMVVDRLCLIIFTMFTILAT-- 795
Fly 796 --IAVLLSAPHIIV 807 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 177/497 (36%) |
chrna5 | NP_001017885.1 | LIC | 12..448 | CDD:273305 | 181/516 (35%) |
Neur_chan_LBD | 36..239 | CDD:280998 | 92/210 (44%) | ||
Neur_chan_memb | 246..446 | CDD:280999 | 81/272 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |