Protein Alignment nAChRalpha5 and NtR

DIOPT Version :9

• Sequence 1: NP_001356885.1
• Gene: nAChRalpha5 / 34826
• FlyBaseID: FBgn0028875
• Length: 837
• Species: Drosophila melanogaster
• Sequence 2: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Alignment Length: 342
• Identity: 74/342 - (21%)
• Similarity: 130/342 - (38%)
• Gaps: 45/342 - (13%)

  Fly   299 YLNLSAKVCLAGYHEKRLLHDL-LDPYNTLERPVL------------------NESDPLQL---S 341
            ||:.|:    .|.:..|..:|. .|.|.:...|::                  |.|.|..|   |
  Fly   180 YLSFSS----FGSNTARWFYDCGFDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSIS 240

  Fly   342 FGLTLMQIIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSAD 406
            |......:. .::.:.||.|.:.:.:.|.|..|.|...|:|.::....|..|||||.:.:.|.|.
  Fly   241 FHFQTRSLA-YEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGAL 304

  Fly   407 EGFDGTYQT-NVVVRNNGS-CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQL 469
            :......|: .::|..||| .||.......|.|......:|.:...|:::.|....:|.:....:
  Fly   305 QSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALI 369

  Fly   470 QDETGGDI--SSYV-LNGEWEL--LGVPGKRNEIYYNCCPEPYI-----DITFAIIIRRRTLYYF 524
            .|:....|  :.:| ....|..  :.|....|:......|:..:     |:.....::|...:|.
  Fly   370 YDDQRKPIAPNEHVNTPSGWSFTQMSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYM 434

  Fly   525 FNLIIPCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFL-NMVAETMPATSDAVPLLGTYFN 588
            ....:|.:......:|.|.|  .|..:.||   ||::|.:.. .::..|..|:...||.:.|.:.
  Fly   435 TVFYLPLIACQMFLILSFVL--RSTRRSSL---ILIALLIAAWGLMYMTRYASPHYVPPMMTAYK 494

  Fly   589 CIMFMVASSVVSTILIL 605
            .||.......:..|.|:
  Fly   495 VIMMTTTYCYILHICII 511

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nAChRalpha5	NP_001356885.1	LIC	313..802	CDD:273305	70/328 (21%)
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052	4/14 (29%)
		Neur_chan_LBD	212..429	CDD:280998	44/217 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010