Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 446 | Identity: | 92/446 - (20%) |
---|---|---|---|
Similarity: | 162/446 - (36%) | Gaps: | 103/446 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 300 LNLSAKVCLAGYHEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLMQIIDVDEKNQLLVTNVW 364
Fly 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPH---RIWKPDVLMYNSADEGFDGTYQTNVVVR--NNGS 424
Fly 425 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDETGGDISSYVLNGEWEL- 488
Fly 489 ----LGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMALLGFTLPPD-S 548
Fly 549 GEKLSLGVTILLSLTVFLNMVAETMPATSDAVPL---LGTYFNCIMFMVASSVVSTILILNYHHR 610
Fly 611 NADTHEMSEWIRIVFLCWLPWILRMSRPGRPLILEFPTTPCSDTSSERKHQILSDVELKERSSKS 675
Fly 676 LLANVLDIDDDFRHNCRPMT----PGGTLPHNPAFYRTVYGQGDDGSIGPIGSTRM 727 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 89/433 (21%) |
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 40/190 (21%) |
Neur_chan_memb | 274..588 | CDD:397193 | 41/209 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447322 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |