Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023533.2 | Gene: | lgc-8 / 3564870 | WormBaseID: | WBGene00013338 | Length: | 438 | Species: | Caenorhabditis elegans |
Alignment Length: | 444 | Identity: | 125/444 - (28%) |
---|---|---|---|
Similarity: | 203/444 - (45%) | Gaps: | 72/444 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 288 LNKHSW-IFL---LIYLNLSAKVCLAGYHEKRLLHD-LLDPYNTLERPVLNESDPLQLSFGLTLM 347
Fly 348 QIIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEG---- 408
Fly 409 ---------FDGTYQTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQ 464
Fly 465 LDLQLQDET---GGDI------SSYVLNGEWELLGVPGKRNEIYYNCCPEPYIDIT-----FAII 515
Fly 516 IRRRTLYYFFNLIIPCVLIASMALLG-FTLPPDSG---EKLSLGVTILLSLTVFLNMVAETMPAT 576
Fly 577 SDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSEWIRIVFLCWLPWILRMSRPGRP 641
Fly 642 LILEFPTTPCSDTSSERKHQILSDVELKERSSKSLLANVLDIDDDFRHNCRPMT 695 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 116/415 (28%) |
lgc-8 | NP_001023533.2 | Neur_chan_LBD | 29..237 | CDD:280998 | 59/232 (25%) |
Neur_chan_memb | 244..>348 | CDD:280999 | 42/111 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |