Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
Alignment Length: | 766 | Identity: | 225/766 - (29%) |
---|---|---|---|
Similarity: | 315/766 - (41%) | Gaps: | 267/766 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 294 IFLLIYLNLSAKVCLAGYHEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLMQIIDVDEKNQL 358
Fly 359 LVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNG 423
Fly 424 SCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDETGG--------DISSY 480
Fly 481 VLNGEWELLGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMALLGFTLP 545
Fly 546 PDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHR 610
Fly 611 NADTHEMSEWIRIVFLCWLPWILRMSRPGRPLI----------------LEF------------- 646
Fly 647 ------PTTPCSDTSSERKHQI-------------------------------LSDVELKERSSK 674
Fly 675 SLLANVLDIDDDFRHNCRPMTPGGTLPH--NPAFYRTV---------------YGQGDDGSIGPI 722
Fly 723 G---------------------------STRMPD-AVTHHTCIKSSTEY---------------- 743
Fly 744 ----------------------------------------------------------------- 743
Fly 744 --------------------------------------------------------ELGLILKEI 752
Fly 753 RFITDQLRKDDECNDIANDWKFAAMVVDRLCLIIFTMFTILATIAVLLSAP 803 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 219/744 (29%) |
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 103/214 (48%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 54/110 (49%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | 22/76 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447296 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |