Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498656.3 | Gene: | lgc-12 / 187855 | WormBaseID: | WBGene00020048 | Length: | 428 | Species: | Caenorhabditis elegans |
Alignment Length: | 412 | Identity: | 112/412 - (27%) |
---|---|---|---|
Similarity: | 195/412 - (47%) | Gaps: | 44/412 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 ILNGLNKHSWIFLLIYLNLSAKVCLAGYHEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLMQ 348
Fly 349 IIDVDEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTY 413
Fly 414 QTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDETGGDIS 478
Fly 479 SYVLNGEWELLGVPG-KRNEIYYNCC--PEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMALL 540
Fly 541 GFTLP----PDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVST 601
Fly 602 ILILNYHHRNADTHEMSEWIRIVFLCWLP--WILRMSRPGR---PLI-LEFPTTPCS--DTSSE- 657
Fly 658 -------RKHQILSDVELKERS 672 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 105/383 (27%) |
lgc-12 | NP_498656.3 | Neur_chan_LBD | 29..235 | CDD:280998 | 56/209 (27%) |
Neur_chan_memb | 242..>345 | CDD:280999 | 34/114 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D845098at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |