Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_501410.3 | Gene: | lgc-6 / 184621 | WormBaseID: | WBGene00017544 | Length: | 425 | Species: | Caenorhabditis elegans |
Alignment Length: | 355 | Identity: | 94/355 - (26%) |
---|---|---|---|
Similarity: | 167/355 - (47%) | Gaps: | 39/355 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 293 WIFLLIYLNLSAKVCLAGYHEKRLLHDLLD-PYNTLERPVLNESDPLQLSFGLTLMQ----IIDV 352
Fly 353 DEKNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKD-LRIPPHRIWKPDVLMYNSADEG--FDGTYQ 414
Fly 415 TNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ-----LQDETG 474
Fly 475 GDISSYVLNGEWELLGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMAL 539
Fly 540 LG-FTLPPDSGE-----KLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSV 598
Fly 599 VSTILI-LNYHHRNADTHEMSEWIRIVFLC 627 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 89/335 (27%) |
lgc-6 | NP_501410.3 | LIC | 1..424 | CDD:273305 | 94/355 (26%) |
LGIC_ECD_cation | 42..226 | CDD:349790 | 49/191 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |