Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_509556.4 | Gene: | lgc-4 / 181155 | WormBaseID: | WBGene00017580 | Length: | 635 | Species: | Caenorhabditis elegans |
Alignment Length: | 525 | Identity: | 176/525 - (33%) |
---|---|---|---|
Similarity: | 280/525 - (53%) | Gaps: | 56/525 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 313 EKRLLHDLLD--PYNTLERPVLNESDPLQLSFGLTLMQIIDVDEKNQLLVTNVWLKLEWNDMNLR 375
Fly 376 WNTSDYGGVKDLRIPPHRIWKPDVLMYNSA-DEGFDGTYQTNVVVRNNGSCLYVPPGIFKSTCKI 439
Fly 440 DITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDETGGDISSYVLNGEWELLGVPGKRNEIYY-NCC 503
Fly 504 PEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLNM 568
Fly 569 VAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADTHE-------MSEWIRIVFL 626
Fly 627 CWLPWILRMS--RPGRPLILEFPTTPCSDTSSERKHQILSDVE-LKERS-----SKSLLAN-VLD 682
Fly 683 IDDDFRH-------NC-----RPMTPGGTLPHNPAFYRTVYGQGDDGSIGPIGSTRMPDAVTHHT 735
Fly 736 CIKSSTEYELGLILKEIRFITDQ--LRKD--DECNDIANDWKFAAMVVDRLCLIIF---TMFTIL 793
Fly 794 ATIAV 798 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 176/525 (34%) |
lgc-4 | NP_509556.4 | Neur_chan_LBD | 111..321 | CDD:280998 | 74/210 (35%) |
Neur_chan_memb | 329..>457 | CDD:280999 | 50/135 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D363540at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |