Sequence 1: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001380111.1 | Gene: | des-2 / 179574 | WormBaseID: | WBGene00000955 | Length: | 559 | Species: | Caenorhabditis elegans |
Alignment Length: | 583 | Identity: | 163/583 - (27%) |
---|---|---|---|
Similarity: | 263/583 - (45%) | Gaps: | 101/583 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 298 IYLNLSAKVCLAGY---HEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLMQIIDVDEKNQLL 359
Fly 360 VTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQ------TNVV 418
Fly 419 VRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD-LQLQDETGGDISSYVL 482
Fly 483 NGEWELLGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLIIPCVLIASMALLG-FTLPP 546
Fly 547 DSG---EKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYH 608
Fly 609 HRNADTHEMSEWIRIVFLCWLPWILRMSRPGR--------------PLILEFPTTPCSDTSSERK 659
Fly 660 HQILSDVELKERSSKSLLANVLDIDDDFRHNCRPMTPGGTLPHNPAFYRTVYGQGDDGSIGPI-- 722
Fly 723 ---GSTRMPDAVTHHTCIKSSTEYELGLILKEI--RFITDQLR-KDDECNDIA------------ 769
Fly 770 -------------NDWKFAAMVVDRLCLIIFTMFTILATIAVLLSAPHIIVSXPYGRGGYCYW 819 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 156/546 (29%) |
des-2 | NP_001380111.1 | Neur_chan_LBD | 28..222 | CDD:397192 | 72/195 (37%) |
LGIC_TM_cation | 239..>332 | CDD:349853 | 34/92 (37%) | ||
TM1 helix | 243..263 | CDD:349853 | 9/19 (47%) | ||
TM2 helix | 275..296 | CDD:349853 | 9/20 (45%) | ||
TM3 helix | 307..329 | CDD:349853 | 2/21 (10%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |