DRSC/TRiP Functional Genomics Resources

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Protein Alignment nAChRalpha5 and LOC1270457

DIOPT Version :10

Sequence 1:NP_001356885.1 Gene:nAChRalpha5 / 34826 FlyBaseID:FBgn0028875 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_061509986.1 Gene:LOC1270457 / 1270457 VectorBaseID:AGAMI1_000573 Length:658 Species:Anopheles gambiae


Alignment Length:581 Identity:433/581 - (74%)
Similarity:484/581 - (83%) Gaps:36/581 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 ASTIAFISYLGSFAAQLRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSAKVCLAGY 311
            :|.|..:|.|...||    |..|||....:|..::|.::. |:....:.|::.:.....|..|||
Mosquito    95 SSIIGAVSGLAPVAA----SRCSSSAVGCAGTHTATAVVL-LSVRQLLPLILGIAAMLPVIDAGY 154

  Fly   312 HEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLMQIIDVDEKNQLLVTNVWLKLEWNDMNLRW 376
            |||||||.|||.||.|||||:|||||||||||||||||||||||||||:||:||||||||||:||
Mosquito   155 HEKRLLHHLLDNYNVLERPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRW 219

  Fly   377 NTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLYVPPGIFKSTCKIDI 441
            |:|:||||:||||||||:|||||||||||||||||||.|||||||||||||||||||||||||||
Mosquito   220 NSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDI 284

  Fly   442 TWFPFDDQRCEMKFGSWTYDGFQLDLQLQDETGGDISSYVLNGEWELLGVPGKRNEIYYNCCPEP 506
            |||||||||||||||||||||||||||||||:||||||::.||||||||||||||||||||||||
Mosquito   285 TWFPFDDQRCEMKFGSWTYDGFQLDLQLQDESGGDISSFITNGEWELLGVPGKRNEIYYNCCPEP 349

  Fly   507 YIDITFAIIIRRRTLYYFFNLIIPCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAE 571
            ||||||||:|||:|||||||||:||||||||||||||||||||||||||||||||||||||||||
Mosquito   350 YIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAE 414

  Fly   572 TMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNADTHEMSEWIRIVFLCWLPWILRMS 636
            ||||||||||||||||||||||||||||||||||||||||:||||||||||:|||.|||:|||||
Mosquito   415 TMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNSDTHEMSEWIRVVFLIWLPFILRMS 479

  Fly   637 RPGRPLILEFPTTPCSDTSSERKHQILSDVELKERSSKSLLANVLDIDDDFR--HNCRPMTPGGT 699
            |||.|    :| .||..|..|:..| |.:||::|||||||||||||||||||  |.|      .|
Mosquito   480 RPGEP----YP-HPCRPTVDEKNKQ-LQEVEMRERSSKSLLANVLDIDDDFRCNHRC------NT 532

  Fly   700 LPHNPAFYRTVYGQGDDGSIGPIGST-----------------RMPDAVTHHTCIKSSTEYELGL 747
            |||||.:|||||.||:|||:||||:|                 |:.:.|:.|||:.||.||||.|
Mosquito   533 LPHNPTYYRTVYRQGEDGSVGPIGATDTIGRSAGLGTISAGGGRLHETVSSHTCLSSSAEYELAL 597

  Fly   748 ILKEIRFITDQLRKDDECNDIANDWKFAAMVVDRLCLIIFTMFTILATIAVLLSAPHIIVS 808
            ||||:|:|||||||:||..::..:|||||||||||||||||:|||:||:|||.||||.|||
Mosquito   598 ILKELRYITDQLRKEDETGEVTREWKFAAMVVDRLCLIIFTLFTIIATLAVLFSAPHFIVS 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nAChRalpha5NP_001356885.1 LIC 313..802 CDD:455710 407/507 (80%)
LOC1270457XP_061509986.1 None

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