DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC4 and Megf6

DIOPT Version :10

Sequence 1:NP_609698.2 Gene:NimC4 / 34824 FlyBaseID:FBgn0260011 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_075244.1 Gene:Megf6 / 65049 RGDID:621188 Length:1574 Species:Rattus norvegicus


Alignment Length:468 Identity:108/468 - (23%)
Similarity:155/468 - (33%) Gaps:163/468 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IWKKT-----------EKITEIYDSEEE--QVTHRLVRECCPGYLQ---------------VESG 87
            :|::|           |:.|..|.|..:  ....|.|..||||:.|               ..:|
  Rat    68 VWRRTGCAQQAWCIGQERRTVYYMSYRQVYATEARTVFRCCPGWSQKPGQEGCLSDVDECASANG 132

  Fly    88 LCE-PICSR------GCPA-------HASCAAPDRCECISGYVSAR-NHQDGSHYCEPICE---- 133
            .|| |.|:.      .||.       ..:|...|.|...:|....| .:..||:.||  |:    
  Rat   133 GCEGPCCNTVGGFYCRCPPGYQLQGDGKTCQDVDECRAHNGGCQHRCVNTPGSYLCE--CKPGFR 195

  Fly   134 -----------TPCPAG-----AQC----VTPNTCACRDGYTQLQ----------PTDDGVSGGC 168
                       :.|..|     .||    ||.:.|.||..| |||          |..:| :|||
  Rat   196 LHTDGRTCLAISSCTLGNGGCQHQCVQLTVTQHRCQCRPQY-QLQEDGRRCVRRSPCAEG-NGGC 258

  Fly   169 APVCR-----VGDGCANG--------KCIDVDRCA--------------------CNSGYRWDKA 200
            ..:|:     ...||..|        .|.|||.||                    |::||.....
  Rat   259 MHICQELRGLAHCGCHPGYQLAADRKTCEDVDECALGLAQCAHGCLNTQGSFKCVCHAGYELGAD 323

  Fly   201 EERCIELSAESISEELETTEDNTD--SPSTSSTAVFTATHCPDDFVLFRGECREKQFDSNDVGCL 263
            ..:|..:..|.::    :.|....  |...|.|:......||..:.|  .|.::...|.:|  |.
  Rat   324 GRQCYRIEMEIVN----SCEAGNGGCSHGCSHTSTGPLCTCPRGYEL--DEDQKTCIDIDD--CA 380

  Fly   264 KSGCGPHQTCLDS-GVCQCS---------DGYVPEESGE-ATGVLSCRRTL-------------- 303
            .|.| ..|.|.:: |..:||         ||...|:..| |:|...|....              
  Rat   381 NSPC-CQQACANTPGGYECSCFAGYRLNTDGCGCEDVDECASGHGGCEHHCSNLAGSFQCFCEAG 444

  Fly   304 --LDQ----ILGLNEAIDDDDELNPWTIPIIGVACGFLFVLL--IVGLLGGRRYRQERAALANKE 360
              ||:    ...|.|::.|.|...|:..|:..:|     ||.  :..|.......:|.||.|...
  Rat   445 YRLDEDRRGCTSLEESVVDLDGRLPFVRPLPHIA-----VLRDELPRLFQDDYGAEEEAAAAELR 504

  Fly   361 MECQYSQKTVDVD 373
            .|...::|.|.:|
  Rat   505 GEHTLTEKFVCLD 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC4NP_609698.2 None
Megf6NP_075244.1 EMI 41..113 CDD:462204 12/44 (27%)
FXa_inhibition 127..162 CDD:464251 7/34 (21%)
vWFA <154..202 CDD:469594 10/49 (20%)
FXa_inhibition 209..245 CDD:464251 13/36 (36%)
vWFA <237..285 CDD:469594 12/48 (25%)
vWFA <284..325 CDD:469594 9/40 (23%)
FXa_inhibition 338..373 CDD:464251 8/36 (22%)
vWFA <371..410 CDD:469594 10/41 (24%)
vWFA <413..452 CDD:469594 7/38 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1555..1574
Blue background indicates that the domain is not in the aligned region.

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