DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC4 and pear1

DIOPT Version :10

Sequence 1:NP_609698.2 Gene:NimC4 / 34824 FlyBaseID:FBgn0260011 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_700533.4 Gene:pear1 / 571812 ZFINID:ZDB-GENE-091230-1 Length:1020 Species:Danio rerio


Alignment Length:362 Identity:87/362 - (24%)
Similarity:116/362 - (32%) Gaps:114/362 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IWALILVLG-----SIAANAERDNYCERNETIRATVPVTKQRIIVKQP----------SKWKIWK 53
            |..::.|||     |::.:....|.|...|:...:|..:     ..||          ..|...|
Zfish     6 ICVVLFVLGCVCELSLSLDPRDPNVCSLWESFTTSVKES-----YAQPFDQMSEEPCSEPWSANK 65

  Fly    54 KT-EKITEIYDSEEEQVT---HRLVRECCPGYLQVESGLCEPICSRGCPAHASCAAPDRCECISG 114
            .| .:||  |.:...||.   :|...:||||:.: ....|.|.|::.| .|..|.|||||:|..|
Zfish    66 CTRHRIT--YKTLYRQVVKMDYRRRYQCCPGFYE-SRNKCVPRCTKEC-VHGRCVAPDRCQCEMG 126

  Fly   115 Y--VSARNHQDGSHY---CEPICETPCPAGAQC-VTPNTCACRDGYTQLQPTD----DGVSGGCA 169
            :  ....:..||.|:   |..:||  |..|.:| |....|.|..|||.....|    .....||.
Zfish   127 WRGDDCSSSCDGQHWGPGCRRLCE--CQNGGECDVLTGNCQCPAGYTGQHCHDPCPVKWFGQGCR 189

  Fly   170 PVCRVGDGCANGKCID-VDRCACNSGYRWDKAEERCIELSAESISEELETTEDNTDSPSTSSTAV 233
            ..|:.|.|   |.|.. ...|.|..|:.....||.|                     |....   
Zfish   190 QECQCGTG---GICNQTTGECVCKQGFTGTLCEESC---------------------PRPKR--- 227

  Fly   234 FTATHCPDDFVLFRGECREKQFDSNDVGCL-----------------KSGCGPHQTCL------- 274
             .|..||         |:.......:..||                 :.|....:.||       
Zfish   228 -CAARCP---------CQNGGICQGNGVCLCPPGWMGPVCTERCPPGRFGINCSKDCLCHNGGHC 282

  Fly   275 --DSGVCQCSDGYVPEESGE----------ATGVLSC 299
              :.|.|||..||..|...|          ..||..|
Zfish   283 DQEKGQCQCDAGYTGERCNEECPVGTYGEDCKGVCDC 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC4NP_609698.2 None
pear1XP_700533.4 EMI 28..97 CDD:462204 19/75 (25%)
Laminin_EGF 411..451 CDD:395007
Blue background indicates that the domain is not in the aligned region.

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