DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC4 and Dkk4

DIOPT Version :9

Sequence 1:NP_609698.2 Gene:NimC4 / 34824 FlyBaseID:FBgn0260011 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001102802.1 Gene:Dkk4 / 502097 RGDID:1563172 Length:221 Species:Rattus norvegicus


Alignment Length:169 Identity:38/169 - (22%)
Similarity:51/169 - (30%) Gaps:60/169 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IYDSEEEQVTHRLVRECCPGYLQVESGLCEPICSRGCPAHASCAAPDRCECISGY--VSARN--H 121
            ::|......|.|.||..|.     .|.:|       ||  .:....|.|..:...  |..||  .
  Rat    56 LHDERSFCATCRRVRRRCQ-----RSAMC-------CP--GTVCVNDVCTAVENTRPVMDRNTDG 106

  Fly   122 QDGSHYCEPICETPC--------PA-----------GAQCVT-----PNTCACRDGYTQLQPTDD 162
            |||: |.|...:.|.        |:           |..|:.     |..|..|..:|::     
  Rat   107 QDGT-YAEGTTKWPAEENRPQGKPSTKKSQSNKGQEGESCLRTSDCGPGLCCARHFWTKI----- 165

  Fly   163 GVSGGCAPVCRVGDGCANGKCIDV-------DRCACNSG 194
                 |.||...|..|:.....|.       .||.|..|
  Rat   166 -----CKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPG 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC4NP_609698.2 None
Dkk4NP_001102802.1 Dickkopf_N 41..91 CDD:282549 11/48 (23%)
Prokineticin <145..202 CDD:148298 15/65 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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