DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC4 and Scarf1

DIOPT Version :10

Sequence 1:NP_609698.2 Gene:NimC4 / 34824 FlyBaseID:FBgn0260011 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001004157.2 Gene:Scarf1 / 380713 MGIID:2449455 Length:820 Species:Mus musculus


Alignment Length:243 Identity:60/243 - (24%)
Similarity:73/243 - (30%) Gaps:73/243 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 ECCPGYLQVESGLCEPICS--RGCPAHASCAAPDRCECISGYVSAR-----NHQDGSHYCEPICE 133
            :||||:.|.:.....|||.  ..|.....|..|..|.|..|:..|:     ..|...|.|...| 
Mouse    43 QCCPGWRQKDQECTIPICEGPDACRKEEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETC- 106

  Fly   134 TPCPAGAQCVTPNT--CACRDGYTQLQ---PTDDGVSGGCAP---VCRVGDGCANGKCIDVDR-- 188
             ||....|| .|.|  |.|:..|....   |...|..|.|.|   :|....|..:..|    |  
Mouse   107 -PCHPRGQC-EPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTC----RRP 165

  Fly   189 CACNSGYRWDKAEERCIELSAESISEELETTEDNTDSPSTSSTAVFTATHCPDDF----VLFRGE 249
            |.||...|.|:|...|:                                 ||..:    ..|...
Mouse   166 CQCNPASRCDQATGTCV---------------------------------CPPGWWGRRCSFSCN 197

  Fly   250 CREK--QFDSNDVGCLKSGCGPH----------QTCLDSGVCQCSDGY 285
            |...  ..||....||....||.          |..:.||.|.|..|:
Mouse   198 CHTSPCMQDSGRCVCLPGWWGPECSRKCQCVRGQCSVTSGHCSCPPGF 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC4NP_609698.2 None
Scarf1NP_001004157.2 PHA03247 <541..781 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..685
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..820
Blue background indicates that the domain is not in the aligned region.

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