DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC4 and lag-2

DIOPT Version :9

Sequence 1:NP_609698.2 Gene:NimC4 / 34824 FlyBaseID:FBgn0260011 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_503877.1 Gene:lag-2 / 178755 WormBaseID:WBGene00002246 Length:402 Species:Caenorhabditis elegans


Alignment Length:239 Identity:62/239 - (25%)
Similarity:82/239 - (34%) Gaps:88/239 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 CSRGCPAHASCAAPDRCE------CISGYVSARNHQDGSHYCEPI----CETPCPAGAQCVT--- 144
            |...|.||.:.||..||:      |..|::       |.|..:.:    |.  |.....||:   
 Worm   133 CENFCDAHLAKAARKRCDAMGRLRCDIGWM-------GPHCGQAVDPRKCS--CENDGICVSSMI 188

  Fly   145 ----PN--------TCACRDGYT----------QLQPTDDGVSGGCAP---VCRVGDGCANG-KC 183
                ||        .|.|.:|:|          |.|.|        ||   .|.|.|.|.|| ||
 Worm   189 HPSQPNQTSSNEQLICECTNGFTGTRCEIFGFNQFQLT--------APRPDACSVKDACLNGAKC 245

  Fly   184 IDVDR---CACNSGYRWDKAEERCIELSAESISEELETTEDNTDSPSTSSTAVFTATHCPDDFVL 245
            .....   |:|..|:..:..|        .|::....||.:.|.|.|..|:||:.....   ||:
 Worm   246 FPNGPKVFCSCAVGFIGEFCE--------ISLTTTTPTTVEITVSTSGYSSAVYITVAL---FVI 299

  Fly   246 FRGECREKQFDSNDVGCLKSGCGP-HQTCLDSGVCQCSDGYVPE 288
            |          |..:||.|....| .|..|       :.|.|||
 Worm   300 F----------SIIIGCFKYKFKPMRQQAL-------ARGQVPE 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC4NP_609698.2 None
lag-2NP_503877.1 DSL 103..166 CDD:128366 11/39 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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