DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC4 and dsl-6

DIOPT Version :10

Sequence 1:NP_609698.2 Gene:NimC4 / 34824 FlyBaseID:FBgn0260011 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_502148.2 Gene:dsl-6 / 178063 WormBaseID:WBGene00001108 Length:303 Species:Caenorhabditis elegans


Alignment Length:183 Identity:42/183 - (22%)
Similarity:58/183 - (31%) Gaps:60/183 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 DRCECISGYVSARNHQDGSHY-CEPICETPCPAGAQC---VTPNTCACRDGYTQLQPTDDGVSGG 167
            ::|:.....:..|.|....:| ..|.|.... .||.|   :||..|:|::               
 Worm   128 EKCDVFCDNIEQRLHGKRCNYRGVPSCLNMF-TGAGCMKMITPMDCSCKN--------------- 176

  Fly   168 CAPVCRVGDGCANGKCID---VDRCACNSGYRWDKAEE------RCIELSAE----------SIS 213
                        ||||:|   ...|.|..|::.|..||      ..|.:..|          ||.
 Worm   177 ------------NGKCVDSAETPICECTRGFKGDTCEEMHETIKAAINVQQEEIGCGGSIHNSIM 229

  Fly   214 EEL------ETTEDNTDSPSTSST-AVFTA--THCPDDFVLFRGECREKQFDS 257
            |.|      |..:|.......|.. |:|.|  :..|.|..|....|.....||
 Worm   230 ENLVLNQMREVKQDTMFQLLRSLVGAIFGAISSVLPIDGTLGNAACNNSLVDS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC4NP_609698.2 None
dsl-6NP_502148.2 DSL 101..163 CDD:128366 8/35 (23%)
EGF_CA <174..201 CDD:238011 10/53 (19%)

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