DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and AT1G15740

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_563980.2 Gene:AT1G15740 / 838143 AraportID:AT1G15740 Length:585 Species:Arabidopsis thaliana


Alignment Length:474 Identity:117/474 - (24%)
Similarity:194/474 - (40%) Gaps:134/474 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LLHLELQHSGLSDLDDFSLNGLTKLQYLS-----------LSH-NNLSSLRSWS--------SEP 109
            ||.::...|.::|....||.|.|.|:.|:           |.| :.||:|.|.|        ::.
plant   140 LLSVDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQG 204

  Fly   110 LGALTNLDLSHNMLSKLSVKSFEQYP-------------QLQQLDLRY-NRISQIENDSFDGLSH 160
            :.||:||    ..|.||.:   |:.|             :|:.|:::: |.|:..:.:....|::
plant   205 MRALSNL----VNLKKLDL---EKCPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLSVLTN 262

  Fly   161 LKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQ---H--------------------NRIEFIE--M 200
            |:.|.:..:::..|..|:.:||::|:.|:|:   |                    ||..|.:  .
plant   263 LRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNFSDSGC 327

  Fly   201 DSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSS-----NLLQKLEPFVFSKNFELQDL 260
            :.|....:|:.|.|..|.:::...:..:||.:|..|||.|     ..|..|...:..|:.||.|.
plant   328 EKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDT 392

  Fly   261 DLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQL-----------DISFNL 314
            ::..|.:     ..||||.:||.:|:|...|.   |..|..|..|..|           |...:.
plant   393 EVGSNGL-----RHLSGLSNLESINLSFTVVT---DSGLRKLSGLTSLRTLNLDARHVTDAGLSA 449

  Fly   315 LTTLPDNLFHFNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAF----------L 369
            ||:|        |.|..:.|...:|.:..:..:.|...|:.:::.|..::|...          |
plant   450 LTSL--------TGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLTL 506

  Fly   370 DRLSPSVNRFTLYVDLSS--NRLKSLNLSS-------------LLHFRYINLADNNWSCNWLVAN 419
            ..||.:.|.....::|.|  ..|.|||:|:             |.:.|.:.|.    ||. |.||
plant   507 LNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLE----SCK-LSAN 566

  Fly   420 LVQK-----LPNSVNFARP 433
            .::|     |||.||| ||
plant   567 DIRKLQATDLPNLVNF-RP 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380
LRR_8 64..123 CDD:290566 21/77 (27%)
leucine-rich repeat 65..88 CDD:275380 7/22 (32%)
leucine-rich repeat 89..112 CDD:275380 9/42 (21%)
leucine-rich repeat 113..136 CDD:275380 8/35 (23%)
LRR_RI 115..384 CDD:238064 74/333 (22%)
LRR_8 135..195 CDD:290566 17/96 (18%)
leucine-rich repeat 137..160 CDD:275380 5/23 (22%)
leucine-rich repeat 161..184 CDD:275380 6/22 (27%)
LRR_8 184..243 CDD:290566 19/88 (22%)
leucine-rich repeat 185..208 CDD:275380 8/47 (17%)
leucine-rich repeat 209..232 CDD:275380 6/22 (27%)
LRR_8 232..289 CDD:290566 20/61 (33%)
leucine-rich repeat 233..256 CDD:275380 8/27 (30%)
leucine-rich repeat 257..280 CDD:275380 7/22 (32%)
LRR_8 280..339 CDD:290566 17/69 (25%)
leucine-rich repeat 281..304 CDD:275380 8/22 (36%)
leucine-rich repeat 305..328 CDD:275380 6/33 (18%)
AT1G15740NP_563980.2 leucine-rich repeat 62..98 CDD:275381
AMN1 86..275 CDD:187754 33/141 (23%)
leucine-rich repeat 114..139 CDD:275381
leucine-rich repeat 164..188 CDD:275381 5/23 (22%)
leucine-rich repeat 189..213 CDD:275381 7/27 (26%)
leucine-rich repeat 214..237 CDD:275381 5/25 (20%)
leucine-rich repeat 238..262 CDD:275381 5/23 (22%)
leucine-rich repeat 263..297 CDD:275381 9/33 (27%)
LRR_RI <298..470 CDD:238064 44/187 (24%)
leucine-rich repeat 298..335 CDD:275381 4/36 (11%)
LRR_8 311..370 CDD:290566 15/58 (26%)
leucine-rich repeat 336..359 CDD:275381 6/22 (27%)
leucine-rich repeat 384..402 CDD:275380 5/22 (23%)
leucine-rich repeat 408..431 CDD:275381 9/25 (36%)
leucine-rich repeat 432..455 CDD:275381 5/30 (17%)
leucine-rich repeat 456..479 CDD:275381 4/22 (18%)
leucine-rich repeat 480..523 CDD:275381 7/42 (17%)
leucine-rich repeat 529..552 CDD:275380 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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