DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and AT5G63930

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_201198.1 Gene:AT5G63930 / 836514 AraportID:AT5G63930 Length:1102 Species:Arabidopsis thaliana


Alignment Length:497 Identity:123/497 - (24%)
Similarity:185/497 - (37%) Gaps:137/497 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LSDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSE---PLG-------------ALTNLDLSHNML 123
            :|:....:|.|...|:..|...:...:||:|:|.   |.|             .:.:|:||..:|
plant    21 ISETTGLNLEGQYLLEIKSKFVDAKQNLRNWNSNDSVPCGWTGVMCSNYSSDPEVLSLNLSSMVL 85

  Fly   124 S-KLSVKSFEQYPQLQQLDLRYNRIS----------------QIENDSFDG--------LSHLKH 163
            | ||| .|......|:||||.||.:|                ::.|:.|||        |..|::
plant    86 SGKLS-PSIGGLVHLKQLDLSYNGLSGKIPKEIGNCSSLEILKLNNNQFDGEIPVEIGKLVSLEN 149

  Fly   164 LYLNGNQLAHIDGSF---FRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFL 225
            |.:..|:   |.||.   ...|..||.|....|.|......|..:...|.|.|..||::|.....
plant   150 LIIYNNR---ISGSLPVEIGNLLSLSQLVTYSNNISGQLPRSIGNLKRLTSFRAGQNMISGSLPS 211

  Fly   226 SQRGLARLVHLNLSSN-----------LLQKLEPFVFSKN-------------FELQDLDLSYNN 266
            ...|...||.|.|:.|           :|:||...:..:|             ..|:.|.|..|.
plant   212 EIGGCESLVMLGLAQNQLSGELPKEIGMLKKLSQVILWENEFSGFIPREISNCTSLETLALYKNQ 276

  Fly   267 ITKLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLLT-TLP---------DN 321
            :.....:.|..|.|||.|.:..|.::......:.:|...:::|.|.|.|| .:|         :.
plant   277 LVGPIPKELGDLQSLEFLYLYRNGLNGTIPREIGNLSYAIEIDFSENALTGEIPLELGNIEGLEL 341

  Fly   322 LFHFNTQLE-----EIILANN------KIEEISSQMMFNQNHLR---YIKLSGNAISDAAFLDRL 372
            |:.|..||.     |:....|      .|..::..:.....:||   .::|..|::|..     :
plant   342 LYLFENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLGFQYLRGLFMLQLFQNSLSGT-----I 401

  Fly   373 SPSVNRFT-LYV-DLSSNRLKSLNLSSL-LHFRYI--NLADNNWS---------CNWLVA----- 418
            .|.:..:: |:| |:|.|.|.....|.| ||...|  ||..||.|         |..||.     
plant   402 PPKLGWYSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNLGTNNLSGNIPTGITTCKTLVQLRLAR 466

  Fly   419 -NLVQKLPNSVNFARPWTVINNLSENTTNVEGIDCIEGGTNR 459
             |||.:.|            :||.:..    .:..||.|.||
plant   467 NNLVGRFP------------SNLCKQV----NVTAIELGQNR 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380
LRR_8 64..123 CDD:290566 14/63 (22%)
leucine-rich repeat 65..88 CDD:275380 3/12 (25%)
leucine-rich repeat 89..112 CDD:275380 8/38 (21%)
leucine-rich repeat 113..136 CDD:275380 9/23 (39%)
LRR_RI 115..384 CDD:238064 84/346 (24%)
LRR_8 135..195 CDD:290566 24/86 (28%)
leucine-rich repeat 137..160 CDD:275380 13/46 (28%)
leucine-rich repeat 161..184 CDD:275380 7/25 (28%)
LRR_8 184..243 CDD:290566 18/69 (26%)
leucine-rich repeat 185..208 CDD:275380 6/22 (27%)
leucine-rich repeat 209..232 CDD:275380 7/22 (32%)
LRR_8 232..289 CDD:290566 19/80 (24%)
leucine-rich repeat 233..256 CDD:275380 9/46 (20%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
LRR_8 280..339 CDD:290566 18/79 (23%)
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..328 CDD:275380 8/32 (25%)
AT5G63930NP_201198.1 LRRNT_2 27..67 CDD:285463 10/39 (26%)
PLN00113 30..1084 CDD:215061 121/488 (25%)
leucine-rich repeat 99..122 CDD:275380 8/22 (36%)
leucine-rich repeat 123..146 CDD:275380 5/22 (23%)
leucine-rich repeat 147..170 CDD:275380 7/25 (28%)
leucine-rich repeat 171..194 CDD:275380 6/22 (27%)
leucine-rich repeat 195..218 CDD:275380 7/22 (32%)
leucine-rich repeat 219..242 CDD:275380 6/22 (27%)
leucine-rich repeat 243..266 CDD:275380 2/22 (9%)
leucine-rich repeat 267..290 CDD:275380 6/22 (27%)
leucine-rich repeat 291..312 CDD:275380 4/20 (20%)
leucine-rich repeat 315..338 CDD:275380 6/22 (27%)
leucine-rich repeat 339..362 CDD:275380 5/22 (23%)
leucine-rich repeat 363..384 CDD:275380 1/20 (5%)
leucine-rich repeat 387..410 CDD:275380 4/27 (15%)
leucine-rich repeat 413..434 CDD:275380 9/20 (45%)
leucine-rich repeat 435..457 CDD:275380 6/21 (29%)
leucine-rich repeat 459..482 CDD:275380 8/38 (21%)
leucine-rich repeat 483..506 CDD:275380 5/10 (50%)
leucine-rich repeat 507..530 CDD:275380
leucine-rich repeat 531..554 CDD:275380
leucine-rich repeat 555..578 CDD:275380
leucine-rich repeat 579..602 CDD:275380
leucine-rich repeat 603..626 CDD:275380
leucine-rich repeat 627..649 CDD:275380
leucine-rich repeat 652..675 CDD:275380
PKc_like 810..1078 CDD:304357
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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