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Protein Alignment CG18095 and GSO1

DIOPT Version :9

Sequence 1:	NP_001188805.1	Gene:	CG18095 / 34823	FlyBaseID:	FBgn0028872	Length:	564	Species:	Drosophila melanogaster
Sequence 2:	NP_193747.2	Gene:	GSO1 / 827760	AraportID:	AT4G20140	Length:	1249	Species:	Arabidopsis thaliana

Alignment Length:	666	Identity:	158/666 - (23%)
Similarity:	238/666 - (35%)	Gaps:	207/666 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly    27 CNNTEVTLIRKTEL-LTSLTLSNCTLPHVENGFFVRFDHLLHLELQHSGLSDLDDFSLNGLTKLQ 90
            |:||  .|.|...| ||.|.|:....|     :|.|||:|:||:|..:.|......:|:.||.|:
plant    65 CDNT--GLFRVIALNLTGLGLTGSISP-----WFGRFDNLIHLDLSSNNLVGPIPTALSNLTSLE 122

  Fly    91 YLSLSHNNLSSLRSWSSEPLGALTN---LDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIEN 152
            .|.|..|.|:   ......||:|.|   |.:..|.|.....::......||.|.|...|::....
plant   123 SLFLFSNQLT---GEIPSQLGSLVNIRSLRIGDNELVGDIPETLGNLVNLQMLALASCRLTGPIP 184

  Fly   153 DSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNT---------H 208
            .....|..::.|.|..|   :::|.....|...|.|::      |...::..:.|         :
plant   185 SQLGRLVRVQSLILQDN---YLEGPIPAELGNCSDLTV------FTAAENMLNGTIPAELGRLEN 240

  Fly   209 LRSLRLDQNLLSSLQFLSQRG-LARLVHLNLSSNLLQKLEPFVFSKNFELQDLDLSYNNIT---- 268
            |..|.|..|.|:. :..||.| :::|.:|:|.:|.||.|.|...:....||.||||.||:|
plant   241 LEILNLANNSLTG-EIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIP 304

  Fly   269 ---------------------KLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISF 312
                                 .|.|...|...:||:|.:|...:.......|....:|.|||:|.
plant   305 EEFWNMSQLLDLVLANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSN 369

  Fly   313 NLLT-TLPDNLFHFNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAIS------------ 364
            |.|. ::|:.||.. .:|.::.|.||.:|...|..:.|..:|:::.|..|.:.
plant   370 NSLAGSIPEALFEL-VELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYHNNLEGKLPKEISALRK 433

  Fly   365 -DAAFL--DRLSPSV-----------------NRFTLYVDLSSNRLKSLNLSSLLHFR------- 402
             :..||  :|.|..:                 |.|...:..|..|||.||   |||.|
plant   434 LEVLFLYENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPSIGRLKELN---LLHLRQNELVGG 495

  Fly   403 ------------YINLADNNWSCN--------------WLVANLVQ-KLPNSVNFARPWTVINNL 440
                        .::||||..|.:              .|..|.:| .||:|:...|..|.| ||
plant   496 LPASLGNCHQLNILDLADNQLSGSIPSSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRI-NL 559

  Fly   441 SENTT--------------------------------NVEGIDCIEGGTN-------------RS 460
            |.|..                                |.:.:|.:..|.|             |.
plant   560 SHNRLNGTIHPLCGSSSYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKIRE 624

  Fly   461 IILLDVS-----GVPQPKSDNCDCVVAYDETN-----PSPPPLTW------------------PK 497
            :.|||:|     |....:...|..:...|..|     |.||   |                  ..
plant   625 LSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPP---WLGKLSQLGELKLSSNQFVES 686

  Fly   498 IPTDRFDSRSVIIWML 513
            :||:.|:...:::..|
plant   687 LPTELFNCTKLLVLSL 702

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.