DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18095 and AT2G25790

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_180150.1 Gene:AT2G25790 / 817121 AraportID:AT2G25790 Length:960 Species:Arabidopsis thaliana


Alignment Length:740 Identity:177/740 - (23%)
Similarity:278/740 - (37%) Gaps:226/740 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PGSLLLLIFSFSPRLSCLQLSKCNNTEVTLIRKTEL------LTSLTLSNCTLPHVENGFFV-RF 62
            |..|:..:|......|||.   .|..|:.|..|:.:      |:|.:.|:.....:.:|... ..
plant    10 PPYLITTLFFLFLNFSCLH---ANELELLLSFKSSIQDPLKHLSSWSYSSTNDVCLWSGVVCNNI 71

  Fly    63 DHLLHLELQHSGLS-DLDDFSLNGLTKLQYLSLSHNNLS-----SLRSWSSEPLGALTNLDLSHN 121
            ..::.|:|....:| .:...:...|..||.::||:||||     .:.:.||.   :|..|:||:|
plant    72 SRVVSLDLSGKNMSGQILTAATFRLPFLQTINLSNNNLSGPIPHDIFTTSSP---SLRYLNLSNN 133

  Fly   122 MLSKLSVKSFEQYPQLQQLDLRYNRIS-QIENDSFDGLSHLKHLYLNGNQL-AHIDGSFFRGLHR 184
            ..|....:.|  .|.|..|||..|..: :|.|| ....|:|:.|.|.||.| .|:.| :...|.|
plant   134 NFSGSIPRGF--LPNLYTLDLSNNMFTGEIYND-IGVFSNLRVLDLGGNVLTGHVPG-YLGNLSR 194

  Fly   185 LSSLSLQHNRIEF---IEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHL-----NLSSN 241
            |..|:|..|::..   :|:...:   :|:.:.|..|.||........||:.|.||     |||..
plant   195 LEFLTLASNQLTGGVPVELGKMK---NLKWIYLGYNNLSGEIPYQIGGLSSLNHLDLVYNNLSGP 256

  Fly   242 L------LQKLEPFVFSKN----------FELQD---LDLSYNNITKLNKEALSGLDSLERLNI- 286
            :      |:|||.....:|          |.||:   ||.|.|:::....|.::.:.|||.|:: 
plant   257 IPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLISLDFSDNSLSGEIPELVAQMQSLEILHLF 321

  Fly   287 SHNYVDKIYDESLDSL--IALLQ----------------------LDISFNLLT-TLPDNLFHFN 326
            |:|...|| .|.:.||  :.:||                      ||:|.|.|| .|||.|.. :
plant   322 SNNLTGKI-PEGVTSLPRLKVLQLWSNRFSGGIPANLGKHNNLTVLDLSTNNLTGKLPDTLCD-S 384

  Fly   327 TQLEEIILANNKIEE---------ISSQMMFNQNH---------------LRYIKLSGNAIS--- 364
            ..|.::||.:|.::.         .|.:.:..||:               :.::.||.|.:.   
plant   385 GHLTKLILFSNSLDSQIPPSLGMCQSLERVRLQNNGFSGKLPRGFTKLQLVNFLDLSNNNLQGNI 449

  Fly   365 ---DAAFLDRLSPSVNRF------------------------------------TLYVDLSSNRL 390
               |...|:.|..|||:|                                    .:.:|||.|.:
plant   450 NTWDMPQLEMLDLSVNKFFGELPDFSRSKRLKKLDLSRNKISGVVPQGLMTFPEIMDLDLSENEI 514

  Fly   391 KSL---NLSSLLHFRYINLADNNW-------------------SCNWLVANLVQKLPN-----SV 428
            ..:   .|||..:...::|:.||:                   |||.|...:.:.|.|     .|
plant   515 TGVIPRELSSCKNLVNLDLSHNNFTGEIPSSFAEFQVLSDLDLSCNQLSGEIPKNLGNIESLVQV 579

  Fly   429 NFAR-------PWTVINNLSENTTNVEG-ID-CIEGGTNRSIILLDVSGVPQPKSDNCDCVVAYD 484
            |.:.       |:|.. .|:.|.|.||| || |.|.         ..||: :|      |.|...
plant   580 NISHNLLHGSLPFTGA-FLAINATAVEGNIDLCSEN---------SASGL-RP------CKVVRK 627

  Fly   485 ETNPSPPPLTWPKIPTDRFDSRSVIIWMLVAIAIAF---------------SGLRWLRRFVDRNE 534
            .:..|     |..|.|..|.:...::.....|.:.|               .|.:|..:|.|   
plant   628 RSTKS-----WWLIITSTFAAFLAVLVSGFFIVLVFQRTHNVLEVKKVEQEDGTKWETQFFD--- 684

  Fly   535 KRKLGQKMLHNVYVSKVQWQAIRTD 559
             .|..:....|..:|.::.|.:..|
plant   685 -SKFMKSFTVNTILSSLKDQNVLVD 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380 4/23 (17%)
LRR_8 64..123 CDD:290566 19/64 (30%)
leucine-rich repeat 65..88 CDD:275380 4/23 (17%)
leucine-rich repeat 89..112 CDD:275380 10/27 (37%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
LRR_RI 115..384 CDD:238064 97/389 (25%)
LRR_8 135..195 CDD:290566 24/61 (39%)
leucine-rich repeat 137..160 CDD:275380 8/23 (35%)
leucine-rich repeat 161..184 CDD:275380 9/23 (39%)
LRR_8 184..243 CDD:290566 19/72 (26%)
leucine-rich repeat 185..208 CDD:275380 5/25 (20%)
leucine-rich repeat 209..232 CDD:275380 7/22 (32%)
LRR_8 232..289 CDD:290566 24/81 (30%)
leucine-rich repeat 233..256 CDD:275380 11/43 (26%)
leucine-rich repeat 257..280 CDD:275380 7/25 (28%)
LRR_8 280..339 CDD:290566 27/84 (32%)
leucine-rich repeat 281..304 CDD:275380 10/25 (40%)
leucine-rich repeat 305..328 CDD:275380 12/45 (27%)
AT2G25790NP_180150.1 PLN00113 12..960 CDD:215061 176/738 (24%)
leucine-rich repeat 74..98 CDD:275380 4/23 (17%)
leucine-rich repeat 99..124 CDD:275380 10/27 (37%)
leucine-rich repeat 125..146 CDD:275380 7/22 (32%)
leucine-rich repeat 147..170 CDD:275380 8/23 (35%)
leucine-rich repeat 171..194 CDD:275380 9/23 (39%)
leucine-rich repeat 195..218 CDD:275380 5/25 (20%)
leucine-rich repeat 219..242 CDD:275380 7/22 (32%)
leucine-rich repeat 243..266 CDD:275380 7/22 (32%)
leucine-rich repeat 267..290 CDD:275380 5/22 (23%)
leucine-rich repeat 291..314 CDD:275380 5/22 (23%)
leucine-rich repeat 315..336 CDD:275380 8/21 (38%)
leucine-rich repeat 339..362 CDD:275380 2/22 (9%)
leucine-rich repeat 363..383 CDD:275380 10/19 (53%)
leucine-rich repeat 387..405 CDD:275380 4/17 (24%)
leucine-rich repeat 411..434 CDD:275380 2/22 (9%)
leucine-rich repeat 435..479 CDD:275380 10/43 (23%)
leucine-rich repeat 480..498 CDD:275380 0/17 (0%)
leucine-rich repeat 504..525 CDD:275380 6/20 (30%)
leucine-rich repeat 528..551 CDD:275380 3/22 (14%)
leucine-rich repeat 552..575 CDD:275380 6/22 (27%)
leucine-rich repeat 576..596 CDD:275380 4/20 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.