DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and fmoda

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001025243.1 Gene:fmoda / 791822 ZFINID:ZDB-GENE-041008-23 Length:342 Species:Danio rerio


Alignment Length:272 Identity:78/272 - (28%)
Similarity:129/272 - (47%) Gaps:24/272 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGL 182
            |.||.::.:...:|.....|..:.|..|.|:.:...:|..||:|..||||.|.|..:..:..|.|
Zfish    80 LQHNQITSVPDNAFGNATNLVWVMLHENHINSVGKQAFAKLSNLNRLYLNNNNLTEVPSNLPRSL 144

  Fly   183 HRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLE 247
            .   .|.|.||:|..:..::||...:|..|.|..|.|..:. :..:||..|..|::|.|.|:|:.
Zfish   145 R---DLRLNHNKIGKLAPNAFEGMENLTILLLHHNSLQDIG-VGLKGLKSLTLLDVSRNQLKKVP 205

  Fly   248 PFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHN-YVDKIYDESLDSLIALLQLDIS 311
            .   |....|..|.|..|:|..:....|:...:|:.:..:|| ..:|...::..:...|::||:|
Zfish   206 E---SLPEMLHQLYLDSNSIGAVPANFLNQFSNLQYVRFAHNELTNKGIPQNTFNNSGLVELDLS 267

  Fly   312 FNLLTTLPDNLFHFNTQLEEIILANNKIEEI------SSQMMFNQNHLRYIKLSGNAI------S 364
            ||.|.::|    ..:|.|:.:.|..|:|:|.      |...:.|.:.||.::|.||.|      |
Zfish   268 FNKLESIP----VVSTSLQHLYLQANQIKEFTLGSFCSVVDVMNFSRLRVLRLEGNEIGAGDVPS 328

  Fly   365 DAAFLDRLSPSV 376
            :||...||:..:
Zfish   329 EAALCLRLASDI 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380
LRR_8 64..123 CDD:290566 3/4 (75%)
leucine-rich repeat 65..88 CDD:275380
leucine-rich repeat 89..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380 4/17 (24%)
LRR_RI 115..384 CDD:238064 78/272 (29%)
LRR_8 135..195 CDD:290566 20/59 (34%)
leucine-rich repeat 137..160 CDD:275380 6/22 (27%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
LRR_8 184..243 CDD:290566 18/58 (31%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..232 CDD:275380 7/22 (32%)
LRR_8 232..289 CDD:290566 14/56 (25%)
leucine-rich repeat 233..256 CDD:275380 7/22 (32%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
LRR_8 280..339 CDD:290566 16/59 (27%)
leucine-rich repeat 281..304 CDD:275380 4/23 (17%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
fmodaNP_001025243.1 LRRNT 44..77 CDD:214470
leucine-rich repeat 76..98 CDD:275380 4/17 (24%)
leucine-rich repeat 99..143 CDD:275380 14/43 (33%)
leucine-rich repeat 123..138 CDD:275380 7/14 (50%)
LRR_8 142..201 CDD:290566 20/62 (32%)
LRR_RI <144..325 CDD:238064 54/191 (28%)
leucine-rich repeat 144..167 CDD:275380 8/25 (32%)
leucine-rich repeat 168..190 CDD:275380 7/22 (32%)
leucine-rich repeat 191..210 CDD:275380 7/21 (33%)
leucine-rich repeat 212..235 CDD:275380 6/22 (27%)
LRR_8 234..291 CDD:290566 16/60 (27%)
leucine-rich repeat 236..260 CDD:275380 4/23 (17%)
leucine-rich repeat 261..280 CDD:275380 8/22 (36%)
leucine-rich repeat 281..310 CDD:275380 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45712
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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