DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and Flrt3

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001165631.1 Gene:Flrt3 / 71436 MGIID:1918686 Length:649 Species:Mus musculus


Alignment Length:575 Identity:128/575 - (22%)
Similarity:209/575 - (36%) Gaps:193/575 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPGSLLLLIFSFSP----RLSCLQLSKCNNTEVTLIRKTELLTSLTL---SNCTLPHVENGFFVR 61
            |.|:.:.|.|..:|    ..||..:.:|:...:....::  |||:.:   .:.|..:::|.    
Mouse    10 LIGTKIGLFFQVAPLSVVAKSCPSVCRCDAGFIYCNDRS--LTSIPVGIPEDATTLYLQNN---- 68

  Fly    62 FDHLLHLELQHSGL-SDLDDFSLNGLTKLQYLSLSHNNL----SSLRSWSSEPLGALTNLDLSHN 121
                   ::.:.|: ||     |..|.|:|.:.|.||:|    ::|..:..|       |.|..|
Mouse    69 -------QINNVGIPSD-----LKNLLKVQRIYLYHNSLDEFPTNLPKYVKE-------LHLQEN 114

  Fly   122 MLSKLSVKSFEQYPQLQQLDLRYNRIS--QIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHR 184
            .:..::..|..:.|.|::|.|..|.:|  .||..:|...::|:.|:|:.|.|:.|.|    ||.|
Mouse   115 NIRTITYDSLSKIPYLEELHLDDNSVSAVSIEEGAFRDSNYLRLLFLSRNHLSTIPG----GLPR 175

  Fly   185 -LSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEP 248
             :..|.|..|||..|...|....|.|:.|.||.|||::      .||...|..||          
Mouse   176 TIEELRLDDNRISTISSPSLHGLTSLKRLVLDGNLLNN------HGLGDKVFFNL---------- 224

  Fly   249 FVFSKNFELQDLDLSYNNIT--KLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDIS 311
                  ..|.:|.|..|::|  .:|   |.| .||.:|.:..|:::::...:...|..|.:||:|
Mouse   225 ------VNLTELSLVRNSLTAAPVN---LPG-TSLRKLYLQDNHINRVPPNAFSYLRQLYRLDMS 279

  Fly   312 FNLLTTLPDNLFHFNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSV 376
            .|.|:.||..:|.....:.::||.||.                                      
Mouse   280 NNNLSNLPQGIFDDLDNITQLILRNNP-------------------------------------- 306

  Fly   377 NRFTLYVDLSSNRLKSLNLSSLLHFRYINLADNNWSC----NWLVANLVQKLPNSVN----FARP 433
                                              |.|    .| |.:.:|.||..||    ..:.
Mouse   307 ----------------------------------WYCGCKMKW-VRDWLQSLPVKVNVRGLMCQA 336

  Fly   434 WTVINNLSENTTNVEGIDCIEGGTNRSIILLDVSGVPQPKSDNCDCVVAYDETNPSPPPLTW--- 495
            ...:..::....:.|..||.:.|...:|.:  .:.:|.         .||......|.|:|.   
Mouse   337 PEKVRGMAIKDLSAELFDCKDSGIVSTIQI--TTAIPN---------TAYPAQGQWPAPVTKQPD 390

  Fly   496 ---PKIPTDR----FDSRSVII--------------WMLVAIAIAFSGLR--WLR 527
               ||:..|:    ..||..|:              |.|   |:..:.||  ||:
Mouse   391 IKNPKLIKDQRTTGSPSRKTILITVKSVTPDTIHISWRL---ALPMTALRLSWLK 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380 5/25 (20%)
LRR_8 64..123 CDD:290566 16/63 (25%)
leucine-rich repeat 65..88 CDD:275380 5/23 (22%)
leucine-rich repeat 89..112 CDD:275380 7/26 (27%)
leucine-rich repeat 113..136 CDD:275380 4/22 (18%)
LRR_RI 115..384 CDD:238064 69/273 (25%)
LRR_8 135..195 CDD:290566 22/62 (35%)
leucine-rich repeat 137..160 CDD:275380 8/24 (33%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
LRR_8 184..243 CDD:290566 21/59 (36%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..232 CDD:275380 9/22 (41%)
LRR_8 232..289 CDD:290566 14/58 (24%)
leucine-rich repeat 233..256 CDD:275380 3/22 (14%)
leucine-rich repeat 257..280 CDD:275380 8/24 (33%)
LRR_8 280..339 CDD:290566 18/58 (31%)
leucine-rich repeat 281..304 CDD:275380 4/22 (18%)
leucine-rich repeat 305..328 CDD:275380 9/22 (41%)
Flrt3NP_001165631.1 LRRNT 31..61 CDD:214470 5/31 (16%)
Interaction with ADGRL3. /evidence=ECO:0000250|UniProtKB:Q9NZU0 38..67 4/30 (13%)
LRR 1. /evidence=ECO:0000255 58..82 6/39 (15%)
LRR_4 61..100 CDD:289563 13/54 (24%)
leucine-rich repeat 61..84 CDD:275378 7/38 (18%)
LRR 2. /evidence=ECO:0000255 83..105 7/21 (33%)
leucine-rich repeat 85..104 CDD:275380 6/18 (33%)
LRR_8 106..166 CDD:290566 18/66 (27%)
leucine-rich repeat 106..129 CDD:275380 5/29 (17%)
LRR_RI 107..327 CDD:238064 77/329 (23%)
LRR 3. /evidence=ECO:0000255 107..126 5/25 (20%)
LRR 4. /evidence=ECO:0000255 127..152 9/24 (38%)
leucine-rich repeat 130..155 CDD:275380 8/24 (33%)
LRR 5. /evidence=ECO:0000255 153..176 9/26 (35%)
leucine-rich repeat 156..176 CDD:275380 9/23 (39%)
LRR_8 175..237 CDD:290566 25/83 (30%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
LRR 6. /evidence=ECO:0000255 178..197 7/18 (39%)
LRR 7. /evidence=ECO:0000255 198..223 11/30 (37%)
leucine-rich repeat 201..226 CDD:275380 12/46 (26%)
LRR 8. /evidence=ECO:0000255 224..246 8/40 (20%)
leucine-rich repeat 227..248 CDD:275380 8/24 (33%)
LRR_8 247..306 CDD:290566 17/58 (29%)
LRR 9. /evidence=ECO:0000255 247..269 4/21 (19%)
leucine-rich repeat 249..272 CDD:275380 4/22 (18%)
LRR 10. /evidence=ECO:0000255 270..293 10/22 (45%)
leucine-rich repeat 273..296 CDD:275380 9/22 (41%)
LRRCT 305..356 CDD:214507 12/123 (10%)
fn3 413..478 CDD:278470 7/33 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 629..649
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45712
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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