DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and LGR6

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001017403.1 Gene:LGR6 / 59352 HGNCID:19719 Length:967 Species:Homo sapiens


Alignment Length:612 Identity:142/612 - (23%)
Similarity:235/612 - (38%) Gaps:170/612 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPGSLLLLIFSFSPRLSCLQLSKCNNTEVT--LIRKTELLTSLTLSNCTLPHVENGFFVRFDHLL 66
            :||.|       .|..:.|.||..|.||:.  |......|..|.||...|.|:....|.....|.
Human    60 VPGDL-------DPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLK 117

  Fly    67 HLELQHSGLSDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSEPLGALTNLDLSHNMLSKLSVKSF 131
            .|.||::.|..:...:|..|..||.|.|..|.:|.:...|.|.|.:|.:|.|..|.|:::.|::.
Human   118 ILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRAL 182

  Fly   132 EQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNR-- 194
            ...|.||.:.|..||||.|.:.:|..|:.|..|:|:.|::.|:....|.|||.|.:|.|.:|:  
Human   183 NNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQ 247

  Fly   195 ---------------------------------------------IEFIEMDSFESNTHLRSLRL 214
                                                         |:|:...:|:....|.:|.|
Human   248 EFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSL 312

  Fly   215 ----------DQNLLSSLQFLSQ-------------RGLARLVHLNLSSNLLQKLEPFVFSKNFE 256
                      |....:||:.|:.             :.|.||..|.||.|.:::|..  ..:..:
Human   313 NGAMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELPS--LHRCQK 375

  Fly   257 LQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDN 321
            |:::.|.:|.|.::..:..|.|.||:.|::|.|.:..|:.|:..:|.:|::||::.|.|||||  
Human   376 LEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTLP-- 438

  Fly   322 LFHFNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGN-AISDAAFLDRLSPSVNRFTLYVDL 385
                                     :.....|.::||.|| |:|.|...|               
Human   439 -------------------------LAGLGGLMHLKLKGNLALSQAFSKD--------------- 463

  Fly   386 SSNRLKSLNLSSLLHFRY----------INLADNNWSCNWLVANLVQKLPNSVNFARPWTVINNL 440
            |..:|:.|.:.    :.|          ...|...|....|      .|.:..:..||..::...
Human   464 SFPKLRILEVP----YAYQCCPYGMCASFFKASGQWEAEDL------HLDDEESSKRPLGLLARQ 518

  Fly   441 SENTTNVEGIDCIEGGTNRSIILLDVSGVPQPKSDNCDCVVAYDETNPSPPPLTWPKIPTD-RFD 504
            :||..: :.:|.::         |::.......|..|         :|:|.|..    |.: .|:
Human   519 AENHYD-QDLDELQ---------LEMEDSKPHPSVQC---------SPTPGPFK----PCEYLFE 560

  Fly   505 SRSV--IIWMLVAIAIAFSGLRWLRRF 529
            |..:  .:|.:|.:::..:||..|..|
Human   561 SWGIRLAVWAIVLLSVLCNGLVLLTVF 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 101/387 (26%)
leucine-rich repeat 41..64 CDD:275380 7/22 (32%)
leucine-rich repeat 65..88 CDD:275380 7/22 (32%)
leucine-rich repeat 89..112 CDD:275380 9/22 (41%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
leucine-rich repeat 137..160 CDD:275380 10/22 (45%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..208 CDD:275380 7/69 (10%)
leucine-rich repeat 209..232 CDD:275380 8/45 (18%)
leucine-rich repeat 233..256 CDD:275380 6/22 (27%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
leucine-rich repeat 281..304 CDD:275380 7/22 (32%)
leucine-rich repeat 305..328 CDD:275380 9/22 (41%)
LGR6NP_001017403.1 LRRNT 34..68 CDD:214470 4/14 (29%)
LRR <70..>293 CDD:443914 60/222 (27%)
leucine-rich repeat 70..91 CDD:275380 7/20 (35%)
LRR 1 91..112 7/20 (35%)
leucine-rich repeat 92..115 CDD:275380 7/22 (32%)
LRR 2 115..136 6/20 (30%)
leucine-rich repeat 116..139 CDD:275380 7/22 (32%)
LRR 3 139..160 7/20 (35%)
leucine-rich repeat 140..163 CDD:275380 9/22 (41%)
LRR 4 163..186 6/22 (27%)
leucine-rich repeat 164..187 CDD:275380 6/22 (27%)
LRR 5 187..208 9/20 (45%)
leucine-rich repeat 188..211 CDD:275380 10/22 (45%)
LRR 6 211..232 6/20 (30%)
leucine-rich repeat 212..235 CDD:275380 8/22 (36%)
LRR 7 235..256 4/20 (20%)
leucine-rich repeat 236..258 CDD:275380 4/21 (19%)
LRR 8 258..279 0/20 (0%)
leucine-rich repeat 259..282 CDD:275380 0/22 (0%)
LRR_8 281..364 CDD:404697 17/82 (21%)
LRR 9 282..303 3/20 (15%)
leucine-rich repeat 283..304 CDD:275380 3/20 (15%)
LRR 10 306..328 4/21 (19%)
LRR 11 329..350 3/20 (15%)
leucine-rich repeat 330..344 CDD:275378 2/13 (15%)
LRR <349..>473 CDD:443914 43/167 (26%)
LRR 12 353..374 7/22 (32%)
leucine-rich repeat 354..399 CDD:275380 12/46 (26%)
LRR 13 375..396 4/20 (20%)
leucine-rich repeat 376..390 CDD:275378 4/13 (31%)
LRR 14 399..420 7/20 (35%)
leucine-rich repeat 400..423 CDD:275380 7/22 (32%)
LRR 15 423..443 9/46 (20%)
leucine-rich repeat 424..444 CDD:275380 9/46 (20%)
7tmA_LGR6 562..834 CDD:320484 6/26 (23%)
TM helix 1 563..589 CDD:320484 6/25 (24%)
TM helix 2 597..622 CDD:320484
TM helix 3 642..672 CDD:320484
TM helix 4 684..706 CDD:320484
TM helix 5 728..757 CDD:320484
TM helix 6 766..796 CDD:320484
TM helix 7 806..831 CDD:320484
Blue background indicates that the domain is not in the aligned region.

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