Sequence 1: | NP_001188805.1 | Gene: | CG18095 / 34823 | FlyBaseID: | FBgn0028872 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245348.1 | Gene: | LRRC4C / 57689 | HGNCID: | 29317 | Length: | 640 | Species: | Homo sapiens |
Alignment Length: | 463 | Identity: | 114/463 - (24%) |
---|---|---|---|
Similarity: | 182/463 - (39%) | Gaps: | 133/463 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 109 PLGALTN---LDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQ 170
Fly 171 LAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQ---RGLAR 232
Fly 233 LVHLNLS-SNL--LQKLEPFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKI 294
Fly 295 YDESLDSLIALLQLDISFNLLTTLPDNLFHFNTQLEEIILANNK-------------IEEISSQM 346
Fly 347 M-------------------FNQNH-----------------------------------LRYIK 357
Fly 358 LSGNAISDAAFLDR---LSPSVNRFT--------LYVDLSSNRLKSLNLSSLLH--------FRY 403
Fly 404 IN---------------LADNNWS----CNWLVANLVQKL-PNSV-----NFARPWTVINNLSEN 443
Fly 444 TTNVEGID 451 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG18095 | NP_001188805.1 | leucine-rich repeat | 41..64 | CDD:275380 | |
LRR_8 | 64..123 | CDD:290566 | 7/16 (44%) | ||
leucine-rich repeat | 65..88 | CDD:275380 | |||
leucine-rich repeat | 89..112 | CDD:275380 | 1/2 (50%) | ||
leucine-rich repeat | 113..136 | CDD:275380 | 8/25 (32%) | ||
LRR_RI | 115..384 | CDD:238064 | 89/355 (25%) | ||
LRR_8 | 135..195 | CDD:290566 | 22/59 (37%) | ||
leucine-rich repeat | 137..160 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 161..184 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 184..243 | CDD:290566 | 24/64 (38%) | ||
leucine-rich repeat | 185..208 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 209..232 | CDD:275380 | 10/25 (40%) | ||
LRR_8 | 232..289 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 233..256 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 257..280 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 280..339 | CDD:290566 | 18/71 (25%) | ||
leucine-rich repeat | 281..304 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 305..328 | CDD:275380 | 8/22 (36%) | ||
LRRC4C | NP_001245348.1 | LRRNT | 47..80 | CDD:214470 | 4/8 (50%) |
PPP1R42 | 65..235 | CDD:411060 | 60/170 (35%) | ||
LRR 1 | 77..98 | 7/20 (35%) | |||
leucine-rich repeat | 78..101 | CDD:275380 | 6/22 (27%) | ||
LRR 2 | 101..122 | 8/20 (40%) | |||
leucine-rich repeat | 102..125 | CDD:275380 | 10/22 (45%) | ||
LRR 3 | 125..146 | 7/20 (35%) | |||
leucine-rich repeat | 126..149 | CDD:275380 | 8/22 (36%) | ||
LRR 4 | 149..170 | 8/20 (40%) | |||
leucine-rich repeat | 150..173 | CDD:275380 | 8/22 (36%) | ||
LRR 5 | 173..195 | 8/23 (35%) | |||
leucine-rich repeat | 174..198 | CDD:275380 | 10/25 (40%) | ||
LRR 6 | 198..219 | 8/20 (40%) | |||
leucine-rich repeat | 199..220 | CDD:275380 | 8/25 (32%) | ||
LRR_8 | 220..279 | CDD:404697 | 15/58 (26%) | ||
LRR 7 | 220..241 | 6/20 (30%) | |||
leucine-rich repeat | 221..244 | CDD:275380 | 8/22 (36%) | ||
LRR 8 | 244..265 | 3/20 (15%) | |||
leucine-rich repeat | 245..268 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 267..>301 | CDD:404697 | 12/33 (36%) | ||
LRR 9 | 268..289 | 8/20 (40%) | |||
leucine-rich repeat | 269..290 | CDD:275380 | 8/20 (40%) | ||
LRRCT | 301..>339 | CDD:214507 | 2/37 (5%) | ||
IG | 360..443 | CDD:214652 | 13/82 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 463..483 | 3/19 (16%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |