DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and flrt2

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001093513.1 Gene:flrt2 / 571972 ZFINID:ZDB-GENE-070705-267 Length:662 Species:Danio rerio


Alignment Length:601 Identity:136/601 - (22%)
Similarity:212/601 - (35%) Gaps:215/601 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLIFSFSPRLSCLQLSKCNNTEVTLIRKTELLTSLTLSNCTLPHVENGFFVRFDHLLHLELQH 72
            ||.|...|||..||.:..:|:.|.|....::  |||:.|.      |:.|:...|.|  :.::.:
Zfish    23 LLSLHVQFSPVSSCPEECRCDRTFVYCNERS--LTSVPLG------VQEGYKTLFLH--NNQINN 77

  Fly    73 SGL-----------------SDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSEPLGALTNLDLSH 120
            :|.                 :.||:|.||....::.|.|..||:.::...:...|..|..|.|..
Zfish    78 AGFPLELHNVASVETVYLYGNQLDEFPLNLPKNVRVLHLQENNIQTISRAALAQLHMLEELHLDD 142

  Fly   121 NMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHR- 184
            |.:|.:.|                      |..:|.....||.|:|..|.|:.|.    .||.. 
Zfish   143 NSISTVGV----------------------EEGAFREALSLKLLFLTKNHLSSIP----IGLPAD 181

  Fly   185 LSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPF 249
            |..|.|..|||..|:.|:|::.|.|:.|.||.|||..                      :.:.|.
Zfish   182 LKELRLDENRIADIDEDAFQNVTTLQRLLLDGNLLED----------------------EAIAPG 224

  Fly   250 VFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISFNL 314
            .|.....|::|.|:.|::|.  ...|....||.:||:..|.:|.|...:...|..|.:||||.||
Zfish   225 TFQDLVNLKELSLARNSLTA--PPPLLPSVSLTKLNLQENQIDTIEVTAFAGLSKLEKLDISNNL 287

  Fly   315 LTTLPDNLFHFNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSVNRF 379
            |..||..:|                                                        
Zfish   288 LQILPPGVF-------------------------------------------------------- 296

  Fly   380 TLYVDLSSNRLKSLNLSSLLHFRYINLADNNWSCN----WLVANLVQKLPNSVNFARPWT----- 435
                    :.|:||        |.:|..:|.|.|:    |::|.| :.||:::| .|.:|     
Zfish   297 --------DGLRSL--------RILNARNNLWRCDCSIKWVIAWL-RSLPSAIN-VRGFTCQSPE 343

  Fly   436 -----VINNLSENTTNVEGIDCIEG-------------------------GTNRSIILLDVSGVP 470
                 ||..|:     ::.|||..|                         .|:|:..:..:|...
Zfish   344 RVRGMVIRELT-----LDAIDCPAGTVLHPWPTHTYPSTLPPRRTSTITKTTSRTTRITTISPTA 403

  Fly   471 -QPKSDNCDCVVAYDETNPSPPPLTWPKIPTDRFDSRSVIIWMLV-AIAIAFSGLRWLRRFVDRN 533
             .|.|           |||:||...:|..|...::....|.:.:| :..|..|   |...|...:
Zfish   404 FYPAS-----------TNPTPPVPHFPPGPLPPYEDPLKISFHVVNSTCIDVS---WESYFTVTS 454

  Fly   534 EK---RKLGQKMLHNV 546
            .|   .|:||.::.::
Zfish   455 YKVTWVKMGQSLMSDI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 83/333 (25%)
leucine-rich repeat 41..64 CDD:275380 7/22 (32%)
leucine-rich repeat 65..88 CDD:275380 6/39 (15%)
leucine-rich repeat 89..112 CDD:275380 5/22 (23%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
leucine-rich repeat 137..160 CDD:275380 2/22 (9%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
leucine-rich repeat 185..208 CDD:275380 9/22 (41%)
leucine-rich repeat 209..232 CDD:275380 7/22 (32%)
leucine-rich repeat 233..256 CDD:275380 2/22 (9%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
leucine-rich repeat 281..304 CDD:275380 7/22 (32%)
leucine-rich repeat 305..328 CDD:275380 11/22 (50%)
flrt2NP_001093513.1 LRRNT 36..62 CDD:214470 8/33 (24%)
leucine-rich repeat 45..65 CDD:275378 7/27 (26%)
leucine-rich repeat 66..89 CDD:275378 3/24 (13%)
LRR <70..>293 CDD:443914 71/274 (26%)
leucine-rich repeat 90..110 CDD:275380 5/19 (26%)
leucine-rich repeat 111..134 CDD:275380 5/22 (23%)
leucine-rich repeat 135..160 CDD:275380 8/46 (17%)
leucine-rich repeat 161..181 CDD:275380 9/23 (39%)
leucine-rich repeat 182..205 CDD:275380 9/22 (41%)
leucine-rich repeat 206..231 CDD:275380 9/46 (20%)
leucine-rich repeat 232..253 CDD:275380 6/22 (27%)
leucine-rich repeat 254..277 CDD:275380 7/22 (32%)
leucine-rich repeat 278..301 CDD:275380 12/86 (14%)
PCC 282..>360 CDD:188093 29/156 (19%)
fn3 429..499 CDD:394996 10/45 (22%)

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