DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and zgc:113307

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001018560.3 Gene:zgc:113307 / 553753 ZFINID:ZDB-GENE-050522-29 Length:363 Species:Danio rerio


Alignment Length:307 Identity:86/307 - (28%)
Similarity:141/307 - (45%) Gaps:58/307 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 HSGLSDLDDFSLNGLT-KLQYLSLSHNNLSSLRSWSSEPLGALTNLDLSHNMLSKLSVKSFEQYP 135
            |.||:.|.    :||. :||||.|..||::||.|                        ::|:...
Zfish    79 HRGLNQLP----SGLPFRLQYLFLQGNNITSLGS------------------------RAFDNTT 115

  Fly   136 QLQQLDLRYNRI--SQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFI 198
            .|:.|.|.:|.:  .|::|..|..|:.|.:|::|.|.|..:......|   |..|.|.:|.||.|
Zfish   116 YLRWLILDHNELLSEQLDNVLFSSLTRLVNLFINHNNLTKVPAGLPSG---LKQLRLAYNHIEKI 177

  Fly   199 EMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPFVFSKNF--ELQDLD 261
            ....|::...|..:.|..|.|.:::....:||..|..|:||.|.|.     .|.|:.  .:|.|.
Zfish   178 SEGDFQNLDSLTLILLQGNRLKTIEEGDFKGLGALNLLDLSHNFLD-----TFPKHLPPSVQQLY 237

  Fly   262 LSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLD----SLIALLQLDISFNLLTTLPDNL 322
            ||.|::|.|::.:|.....|..|.:.||   |:.:|.||    :|.:|::||:|:|.||.:|.  
Zfish   238 LSNNSLTGLSENSLHAFSGLRYLRLGHN---KLRNERLDPGAFNLTSLVELDLSYNRLTEIPS-- 297

  Fly   323 FHFNTQLEEIILANNKIEEISSQMM------FNQNHLRYIKLSGNAI 363
              ....|:.:.|..|.|:|.:....      .:.:.::.::|.||.:
Zfish   298 --VPITLQYLYLEVNHIQEFNVSSFCRTVGPTSYSRMKILRLDGNKL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 80/274 (29%)
leucine-rich repeat 41..64 CDD:275380
leucine-rich repeat 65..88 CDD:275380 6/16 (38%)
leucine-rich repeat 89..112 CDD:275380 10/22 (45%)
leucine-rich repeat 113..136 CDD:275380 1/22 (5%)
leucine-rich repeat 137..160 CDD:275380 8/24 (33%)
leucine-rich repeat 161..184 CDD:275380 6/22 (27%)
leucine-rich repeat 185..208 CDD:275380 8/22 (36%)
leucine-rich repeat 209..232 CDD:275380 6/22 (27%)
leucine-rich repeat 233..256 CDD:275380 8/24 (33%)
leucine-rich repeat 257..280 CDD:275380 8/22 (36%)
leucine-rich repeat 281..304 CDD:275380 9/26 (35%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
zgc:113307NP_001018560.3 None
Blue background indicates that the domain is not in the aligned region.

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