DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and cDIP

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster


Alignment Length:146 Identity:39/146 - (26%)
Similarity:62/146 - (42%) Gaps:48/146 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 RIYKSFGGIK----W-KSNVLLTSMLCPGVVFGLFFVMNLILWSKGSSGAVPFSTL--IALLALW 475
            :|.|..||::    | |:..:::.||       |.:|::: ||.:..    |||.|  ||:..||
  Fly     7 KISKMAGGVQQAIVWFKAGGIVSPML-------LIYVLHM-LWPEFR----PFSILFVIAIGFLW 59

  Fly   476 -----FGVSVPLTFVG---AYFGFRKRSLEHPVRTNQIPRQIPDQSIYTQPIPGIIMGGVLPFGC 532
                 ..|:.|....|   |..|.:..:|    ||             |:|: .::.|.|.  ||
  Fly    60 DRPAGQQVAAPSVTAGSPLAELGAKVWAL----RT-------------TRPL-SMVAGSVA--GC 104

  Fly   533 I-FIQLFFILNSLWSS 547
            : :|.|...:..||.|
  Fly   105 LTYIYLVCYVLPLWLS 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914
leucine-rich repeat 41..64 CDD:275380
leucine-rich repeat 65..88 CDD:275380
leucine-rich repeat 89..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380
leucine-rich repeat 137..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..208 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..256 CDD:275380
leucine-rich repeat 257..280 CDD:275380
leucine-rich repeat 281..304 CDD:275380
leucine-rich repeat 305..328 CDD:275380
cDIPNP_650951.1 LRR 107..>410 CDD:443914 5/14 (36%)
leucine-rich repeat 118..142 CDD:275380 2/3 (67%)
leucine-rich repeat 143..166 CDD:275380
leucine-rich repeat 167..190 CDD:275380
leucine-rich repeat 191..214 CDD:275380
leucine-rich repeat 215..238 CDD:275380
leucine-rich repeat 239..265 CDD:275380
leucine-rich repeat 266..325 CDD:275380
leucine-rich repeat 326..347 CDD:275380
leucine-rich repeat 348..394 CDD:275380
leucine-rich repeat 395..418 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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