DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and MstProx

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster


Alignment Length:676 Identity:142/676 - (21%)
Similarity:230/676 - (34%) Gaps:268/676 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KTELLTSLTLSNCT--------LPHVENG--------FFVRFDHLLHLELQH------------- 72
            |..:||:.|:.|.|        |.|:|..        :|..|..|..:::::             
  Fly   206 KRMVLTNCTVRNLTFLRTLQKSLEHLELDIDNEVDLKYFTNFSSLKFMKVRNYIPNKNFTALICT 270

  Fly    73 -------SGLSDL------------DDFSLN------GLTKL------QY----LSLSHNNLSSL 102
                   .|::.|            ||..||      ||.::      .|    |:.|:|:||.|
  Fly   271 HKNCNFIRGINGLECPKLCQCLYIIDDLELNIDCSNLGLLQIPPLPIPSYGGVKLNFSNNSLSQL 335

  Fly   103 RSWSSEPLGALTNLDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLN 167
            .:.:......:..||:|.|.|:.||:....  .:|..||:.:|.|..:.||....|..:......
  Fly   336 PTMTLPGYKLVKRLDVSRNRLTNLSINHLP--AKLDYLDVSFNEIINMGNDVIKYLRTVPIFKQT 398

  Fly   168 GNQ-LAHIDG----SFFRG----------------LHRLSS---------------LSLQHNRIE 196
            ||| ..|.|.    :|||.                ||.|:.               |.::.....
  Fly   399 GNQWTIHCDDKPLLNFFRHLKLIIRMKSAEMKPMFLHSLTELPKGFLKFLGKHFIWLGVRKQEYY 463

  Fly   197 FIEMDSFESNTH--LRSLRLDQNLLSSLQFLSQRGLARLVHLNLS-------------------- 239
            .|..:....:.|  |.:|....::...:::|.:    :|:.:|..                    
  Fly   464 LINEEQLLQSMHRKLNNLNTIMSIYKYMEWLHR----KLIFVNREYDLFYIRQMAAPCPHKCECC 524

  Fly   240 ---SNLLQKLE---PFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDES 298
               .:|:.|::   .||:  ||.    |:...|...:.|:.:|   |...|::|.|.:..|    
  Fly   525 YSRDSLILKIDCRNKFVY--NFP----DIVARNSRLMGKQNMS---SPMELHLSKNNISNI---- 576

  Fly   299 LDSLIALLQ-----LDISFNLLTTLPDNLFHFNTQLEEIILANNKIEEISSQMMFN--------- 349
               .||:|.     ||:.||.|.||.|.:..:        |..|.|:...|...:|         
  Fly   577 ---TIAMLPKELRFLDLRFNNLVTLDDKVLSY--------LKKNSIKTKLSGNPWNCDCKSRSVL 630

  Fly   350 ---QNH--------LRYIKLSGNAISDAAF--LDRLS----------------PSVNRFTLYVDL 385
               ::|        |:...:|.....|...  ||.|:                ||::....||||
  Fly   631 SILRDHEPLEYDVTLKRCNISPTDCPDVCVCCLDNLTWPSFIVDCRGEGLLQMPSLSSRVTYVDL 695

  Fly   386 SSNRLKSL---NLSSL------LHFRYINLADNNWSCNWLVANLVQKLPNSVNFARPWTVINNLS 441
            .:|.|.:|   |.||:      ||     |.||.|||:   .|.::|    :||      :.::|
  Fly   696 RNNNLTALSQKNRSSIENRSLKLH-----LLDNPWSCS---CNDIEK----INF------MKSVS 742

  Fly   442 ENTTNVEGIDCIEG----GTNRSIILLDVSGVPQPKSDNCDCVVAYDETNPSPPPLTWPKIPTDR 502
            .:..:...|.|..|    ..|:.|:                |                   |:|.
  Fly   743 SSIVDFTEIKCSNGEKLVSINQHIV----------------C-------------------PSDL 772

  Fly   503 FDSRSVIIWMLVAIAIAFSGLRWLRR 528
            |...::.| .|||..||.:.|.|.|:
  Fly   773 FYYLALAI-SLVATIIALNFLIWFRQ 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 88/433 (20%)
leucine-rich repeat 41..64 CDD:275380 10/38 (26%)
leucine-rich repeat 65..88 CDD:275380 9/60 (15%)
leucine-rich repeat 89..112 CDD:275380 7/32 (22%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 9/43 (21%)
leucine-rich repeat 185..208 CDD:275380 3/37 (8%)
leucine-rich repeat 209..232 CDD:275380 3/22 (14%)
leucine-rich repeat 233..256 CDD:275380 7/48 (15%)
leucine-rich repeat 257..280 CDD:275380 4/22 (18%)
leucine-rich repeat 281..304 CDD:275380 4/22 (18%)
leucine-rich repeat 305..328 CDD:275380 9/27 (33%)
MstProxNP_649719.2 PRK15370 <315..>398 CDD:185268 22/84 (26%)
leucine-rich repeat 325..345 CDD:275378 6/19 (32%)
leucine-rich repeat 346..367 CDD:275378 7/22 (32%)
TIR 823..960 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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