DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18095 and Flrt2

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_958926.1 Gene:Flrt2 / 399558 MGIID:3603594 Length:660 Species:Mus musculus


Alignment Length:455 Identity:100/455 - (21%)
Similarity:181/455 - (39%) Gaps:119/455 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 LYLNGNQLAHIDGSFFRGLHRLSSLS---LQHNRIEFIEMDSFESN--THLRSLRLDQNLLSSLQ 223
            |||:.||:.  :..|...||.:.|:.   |..|     ::|.|..|  .::|.|.|.:|   ::|
Mouse    68 LYLHNNQIN--NAGFPAELHNVQSVHTVYLYGN-----QLDEFPMNLPKNVRVLHLQEN---NIQ 122

  Fly   224 FLSQRGLARLV---HLNLSSNLLQK--LEPFVFSKNFELQDLDLSYNNITKLNKEALSGLD-SLE 282
            .:|:..||:|:   .|:|..|.:..  :|...|.:...|:.|.||.|:::.:.    .||. .|:
Mouse   123 TISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVP----VGLPVDLQ 183

  Fly   283 RLNISHNYVDKIYDESLDSLIALLQLDISFNLLTT--LPDNLFHFNTQLEEIILANNKIEEISS- 344
            .|.:..|.:..|.|.:..:|.:|.:|.:..||||.  :.:..|...|:|:|..:..|.:..... 
Mouse   184 ELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRNSLSHPPPD 248

  Fly   345 -------QMMFNQNHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVDLSSNRLKSLN---LSSLL 399
                   ::....|.:.:|.|:  |.::...|:||           |:|:|:|:.|.   ...|.
Mouse   249 LPGTHLIRLYLQDNQINHIPLT--AFANLRKLERL-----------DISNNQLRMLTQGVFDHLS 300

  Fly   400 HFRYINLADNNWSCN----WLVANLVQKLPNSVNF----------ARPWTV--IN-NLSENTTNV 447
            :.:.:...:|.|.|:    | |...::.:|:|:|.          .|...|  :| ||....|..
Mouse   301 NLKQLTARNNPWFCDCSIKW-VTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSCPTTT 364

  Fly   448 EGIDCIE------GGTNRSIILLDVSGVPQPKSDNCDCVVAYDETNPSPPPLTWPKIP------- 499
            .|:....      ..|.:|..|    .||.|...:         ..|:|.|...|.||       
Mouse   365 PGLPVFTPAPSTVSPTTQSPTL----SVPSPSRGS---------VPPAPTPSKLPTIPDWDGRER 416

  Fly   500 -----TDRF--------DSRSVIIWMLVAIAIAFSGLRWLRRFVDRNEKRKLGQKMLHNVYVSKV 551
                 ::|.        |:...:.|:.:...:|:. |.|:          |:|..::..:...::
Mouse   417 VTPPISERIQLSIHFVNDTSIQVSWLSLFTVMAYK-LTWV----------KMGHSLVGGIVQERI 470

  Fly   552  551
            Mouse   471  470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 51/186 (27%)
leucine-rich repeat 41..64 CDD:275380
leucine-rich repeat 65..88 CDD:275380
leucine-rich repeat 89..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380
leucine-rich repeat 137..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380 7/19 (37%)
leucine-rich repeat 185..208 CDD:275380 6/27 (22%)
leucine-rich repeat 209..232 CDD:275380 7/22 (32%)
leucine-rich repeat 233..256 CDD:275380 6/27 (22%)
leucine-rich repeat 257..280 CDD:275380 7/23 (30%)
leucine-rich repeat 281..304 CDD:275380 6/22 (27%)
leucine-rich repeat 305..328 CDD:275380 7/24 (29%)
Flrt2NP_958926.1 LRRNT 35..62 CDD:396168
LRR 50..>310 CDD:443914 65/268 (24%)
LRR 1. /evidence=ECO:0000255 62..87 8/20 (40%)
leucine-rich repeat 65..86 CDD:275378 7/19 (37%)
LRR 2. /evidence=ECO:0000255 88..108 6/24 (25%)
leucine-rich repeat 90..110 CDD:275380 5/24 (21%)
LRR 3. /evidence=ECO:0000255 109..131 7/24 (29%)
leucine-rich repeat 111..134 CDD:275380 9/25 (36%)
LRR 4. /evidence=ECO:0000255 132..157 6/24 (25%)
leucine-rich repeat 135..160 CDD:275380 5/24 (21%)
LRR 5. /evidence=ECO:0000255 159..181 7/25 (28%)
leucine-rich repeat 161..181 CDD:275380 7/23 (30%)
leucine-rich repeat 182..205 CDD:275380 6/22 (27%)
LRR 6. /evidence=ECO:0000255 183..202 4/18 (22%)
LRR 7. /evidence=ECO:0000255 203..228 8/24 (33%)
leucine-rich repeat 206..231 CDD:275380 7/24 (29%)
LRR 8. /evidence=ECO:0000255 229..251 4/21 (19%)
leucine-rich repeat 232..253 CDD:275380 3/20 (15%)
LRR 9. /evidence=ECO:0000255 252..274 4/23 (17%)
leucine-rich repeat 254..277 CDD:275380 4/24 (17%)
LRR 10. /evidence=ECO:0000255 275..298 8/33 (24%)
leucine-rich repeat 278..301 CDD:275380 9/33 (27%)
PCC 282..>359 CDD:188093 19/77 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..413 12/54 (22%)
fn3 426..494 CDD:394996 7/56 (13%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.