DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and flrt2

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002933238.1 Gene:flrt2 / 395015 XenbaseID:XB-GENE-495394 Length:691 Species:Xenopus tropicalis


Alignment Length:694 Identity:145/694 - (20%)
Similarity:252/694 - (36%) Gaps:234/694 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIFSF------SPRLSCLQLSKCNNTEVTLIRKTELLTSLTL---SNCTLPHVEN------GFFV 60
            |:|||      |..::|..:.:|:...:....::  |||:.|   ...|:.::.|      ||..
 Frog    45 LVFSFGLSIQLSQSVACPSVCRCDRNFIYCNERS--LTSVPLGIPEGVTVLYLHNNQINNAGFPA 107

  Fly    61 RFDHLLHLELQHSGLSDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSEPLGALTNLDLSHNMLSK 125
            ...::..::..:...:.||:|.:|....::.|.|..||:.::   |...|..||           
 Frog   108 ELHNVQSVDTVYLYGNQLDEFPMNLPKNVRVLHLQENNIQTI---SRVALAQLT----------- 158

  Fly   126 LSVKSFEQYPQLQQLDLRYNRISQ--IENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHR-LSS 187
                      :|::|.|..|.||.  :|:.:|.....||.|:|:.|.|:.:.    .||.. |..
 Frog   159 ----------KLEELHLDDNSISTVGVEDGAFREAISLKMLFLSKNHLSSVP----VGLPLCLQE 209

  Fly   188 LSLQHNRIEFIEMDSFESNTHLRSLRLDQNLL----------SSLQFLSQRGLAR---------- 232
            |.|..|||..|...:|::.|:|..|.||.|||          |.|..|.:..:.|          
 Frog   210 LRLDENRIATISDQAFQNLTNLERLILDGNLLTNKGITDGTFSHLPKLKEFSMVRNSLTTPPTDL 274

  Fly   233 ----LVHLNLSSNLLQKLEPFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHN--YV 291
                ||.|||..|.:..:....|:...:|:.||:|.|.:..|.|.....|.:|::|...:|  |.
 Frog   275 QGTYLVKLNLQDNQINHIPVSAFASLHKLERLDISNNRLKMLTKGVFDNLTNLKQLTARNNPWYC 339

  Fly   292 D---KIYDESLDSLIALLQL-----------------DISFNLLT-------------------- 316
            |   :...|.|.||.|.:.:                 :::.|||:                    
 Frog   340 DCSIRWVTEWLKSLPAAINVRAFMCQGPEHFRGMAVRELNVNLLSCPTTTPILPPVTSASPTIAP 404

  Fly   317 ------------------------------TLPDNLFHFN--TQLEE------IILANN---KIE 340
                                          ||||.:...:  |.|.:      |...||   .::
 Frog   405 TTPLSTVFIVTPTEAPTEPTPTPSLPPISPTLPDQVIIVDKVTPLHQDRLQIVIHYVNNTCVNVK 469

  Fly   341 EIS--SQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVDLSSNRLKSLNLSSLLHFRY 403
            .||  |.:.|.   |.::|: |:::.:....:|:            :||:|         |||..
 Frog   470 WISFISVISFK---LTWVKM-GHSLVEGIVHERI------------VSSDR---------LHFTL 509

  Fly   404 INLADNNWSCNWLVANLVQKLPNSVNFARPWTVINNLSENTTNVEGIDCIEGGTNRSIILLDVSG 468
            :||...:.....||               |....||.......|    |.|..|..|::   .:|
 Frog   510 VNLEPKSTYRICLV---------------PLDAFNNYQAGEETV----CAEAITKASLL---NNG 552

  Fly   469 VPQPKSDNCDCVVAYDETNP----SPPPLTWPKIPTDRFDSRSVIIWMLVAIAI---------AF 520
            ...|.|        :::|.|    ||..|.       .....:|||.:::.::|         .:
 Frog   553 SNSPSS--------HEQTTPQGMGSPFLLA-------GLIGGAVIIVLVLLLSIFCWHMHKKGRY 602

  Fly   521 SGLRW-LRRFVDRNEKRKLGQKMLHNVY-VSKVQWQAIRTDPDQ 562
            :..:| ..|...:::..:.|.|..:::. :::..:|.:..:.||
 Frog   603 TSQKWKYNRGRRKDDYCEAGTKKDNSILEMTETSFQIVSLNNDQ 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 94/434 (22%)
leucine-rich repeat 41..64 CDD:275380 8/31 (26%)
leucine-rich repeat 65..88 CDD:275380 4/22 (18%)
leucine-rich repeat 89..112 CDD:275380 6/22 (27%)
leucine-rich repeat 113..136 CDD:275380 2/22 (9%)
leucine-rich repeat 137..160 CDD:275380 8/24 (33%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..208 CDD:275380 8/22 (36%)
leucine-rich repeat 209..232 CDD:275380 10/32 (31%)
leucine-rich repeat 233..256 CDD:275380 7/22 (32%)
leucine-rich repeat 257..280 CDD:275380 8/22 (36%)
leucine-rich repeat 281..304 CDD:275380 9/27 (33%)
leucine-rich repeat 305..328 CDD:275380 7/91 (8%)
flrt2XP_002933238.1 LRRNT 60..91 CDD:214470 6/32 (19%)
leucine-rich repeat 90..111 CDD:275378 4/20 (20%)
LRR 91..>336 CDD:443914 69/272 (25%)
leucine-rich repeat 117..135 CDD:275380 4/17 (24%)
leucine-rich repeat 136..159 CDD:275380 8/46 (17%)
leucine-rich repeat 160..185 CDD:275380 8/24 (33%)
leucine-rich repeat 186..206 CDD:275380 8/23 (35%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..256 CDD:275380 9/24 (38%)
leucine-rich repeat 257..278 CDD:275380 2/20 (10%)
leucine-rich repeat 279..302 CDD:275380 7/22 (32%)
leucine-rich repeat 303..326 CDD:275380 8/22 (36%)
PCC 307..>384 CDD:188093 18/76 (24%)
Chi1 <386..>442 CDD:442692 4/55 (7%)
FN3 455..537 CDD:473895 24/121 (20%)

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