DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and CG6749

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster


Alignment Length:488 Identity:133/488 - (27%)
Similarity:203/488 - (41%) Gaps:91/488 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LTSLTLSNCTLPHVENGFFVRFDHLLHLELQHSGLSDLDDFSLNGLTKLQYLSLSHNNLSSLRSW 105
            |..|.||.|.|..:....|.....|..::..|:.:..||......|.||.|.:.|||        
  Fly   106 LRQLNLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRKLIYANFSHN-------- 162

  Fly   106 SSEPLGALTNLDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQ 170
                  ||...||.|             .|.|.:|:|.:||   :.|.:|.....|:.|.||.||
  Fly   163 ------ALKQCDLPH-------------MPLLNRLELGHNR---LVNATFGVCPQLQELILNDNQ 205

  Fly   171 LAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQ----FLSQRGLA 231
            |..:|.:.|||||.|..|.|..||:..|.:::|:....||.|.|.||.|.:|:    ...|..:.
  Fly   206 LIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVL 270

  Fly   232 RLVHLNLSSNLLQKLEPFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYD 296
            .|..|:||.|.::.|....|.....||.||:|.|:|..|:.....||.||.:|.:.:|.:.:|..
  Fly   271 HLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKP 335

  Fly   297 ESLDSLIALLQLDISFNLLTTLPDNLFHFNT--QLEEIILANNKIEEISSQMMFNQNHLRYIKLS 359
            .:..:|:.|..||:|:|.|..|.:.:|..||  ::..:.|..|:::.:......:...|.|:||.
  Fly   336 ATFAALLNLDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLG 400

  Fly   360 GNAISDAAFLD-RLSPSVNRFTLYVDLSSNRLKSLNLSSLLHFRYIN--LADNN----------- 410
            .|.:..   || |:...:.|.. .:.|..|.|:.:||..|.....:.  |.|||           
  Fly   401 HNELKS---LDVRMFAPMRRLQ-KLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFLAKVNVS 461

  Fly   411 -------------WSC-------NWLVANLVQKLPNSVNF---ARPWTVINNLSENTTNVEGIDC 452
                         |.|       :||....|..|.::..:   .||..::.|:.....|::.:  
  Fly   462 FPNLKRVAIEGNPWQCPCFVKLQHWLATRDVVYLRDNTGYYKGERPLCIVTNVDYCIQNLQAV-- 524

  Fly   453 IEGGTNRSIILLDVSGVPQPKSDNCDCVVAYDE 485
                 .|..||.|..| .|.::|      |:|:
  Fly   525 -----RRLGILGDFQG-EQVEAD------AFDD 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 94/302 (31%)
leucine-rich repeat 41..64 CDD:275380 7/22 (32%)
leucine-rich repeat 65..88 CDD:275380 5/22 (23%)
leucine-rich repeat 89..112 CDD:275380 5/22 (23%)
leucine-rich repeat 113..136 CDD:275380 4/22 (18%)
leucine-rich repeat 137..160 CDD:275380 7/22 (32%)
leucine-rich repeat 161..184 CDD:275380 12/22 (55%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..232 CDD:275380 9/26 (35%)
leucine-rich repeat 233..256 CDD:275380 7/22 (32%)
leucine-rich repeat 257..280 CDD:275380 10/22 (45%)
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..328 CDD:275380 10/24 (42%)
CG6749NP_648354.1 LRR_8 104..164 CDD:404697 18/71 (25%)
leucine-rich repeat 106..129 CDD:275380 7/22 (32%)
leucine-rich repeat 130..153 CDD:275380 5/22 (23%)
leucine-rich repeat 154..195 CDD:275380 18/70 (26%)
leucine-rich repeat 196..219 CDD:275380 12/22 (55%)
LRR 199..>452 CDD:443914 82/256 (32%)
leucine-rich repeat 220..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..267 CDD:275380 8/22 (36%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 10/22 (45%)
leucine-rich repeat 320..343 CDD:275380 5/22 (23%)
leucine-rich repeat 344..369 CDD:275380 10/24 (42%)
leucine-rich repeat 370..393 CDD:275380 2/22 (9%)
leucine-rich repeat 394..417 CDD:275380 8/25 (32%)
leucine-rich repeat 418..441 CDD:275380 6/23 (26%)

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