DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and Lrg1

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_038939952.1 Gene:Lrg1 / 367455 RGDID:1359464 Length:342 Species:Rattus norvegicus


Alignment Length:288 Identity:81/288 - (28%)
Similarity:119/288 - (41%) Gaps:43/288 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPGSLLL--LIFSFSPRLSCLQLSKCNNTEVTLIRKTELLTSLTLSNCTLPHVENGFFVRFDHLL 66
            ||.:|.|  |:...|....||.|.....:.|:....||..:||....                 :
  Rat    17 LPRTLFLLALLGGVSGLRECLILQSVKGSTVSCHGPTEFPSSLPADT-----------------V 64

  Fly    67 HLELQHSGLSDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSEPLGALTNLDLSHNMLSKLSVKSF 131
            ||.::.|.|:.|...:|.|...||.|.||.|.|.                :||..:|:.:     
  Rat    65 HLSVEFSSLTQLPAAALQGCPGLQELHLSSNRLQ----------------ELSPGLLAPV----- 108

  Fly   132 EQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIE 196
               |:|:.|||..|.:..:....|...:.|..|.|..|||......:.:||..|..|.|..||:.
  Rat   109 ---PRLRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAENRLR 170

  Fly   197 FIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPFVFSKNFELQDLD 261
            .:......:...|.:|.|..|||.||.....||..||..|:|..|.||:||..:.:....|..|.
  Rat   171 SLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLAPQPFLGVLF 235

  Fly   262 LSYNNITKLNKEALSGLDSLERLNISHN 289
            |:.|.:|.:..::..||..|:.|::|:|
  Rat   236 LNDNQLTAVAADSFRGLKQLDMLDLSNN 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 74/268 (28%)
leucine-rich repeat 41..64 CDD:275380 2/22 (9%)
leucine-rich repeat 65..88 CDD:275380 7/22 (32%)
leucine-rich repeat 89..112 CDD:275380 7/22 (32%)
leucine-rich repeat 113..136 CDD:275380 3/22 (14%)
leucine-rich repeat 137..160 CDD:275380 6/22 (27%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..208 CDD:275380 5/22 (23%)
leucine-rich repeat 209..232 CDD:275380 10/22 (45%)
leucine-rich repeat 233..256 CDD:275380 8/22 (36%)
leucine-rich repeat 257..280 CDD:275380 7/22 (32%)
leucine-rich repeat 281..304 CDD:275380 4/9 (44%)
leucine-rich repeat 305..328 CDD:275380
Lrg1XP_038939952.1 leucine-rich repeat 65..86 CDD:275380 7/20 (35%)
LRR <80..>267 CDD:443914 62/208 (30%)
leucine-rich repeat 87..110 CDD:275380 10/46 (22%)
leucine-rich repeat 111..134 CDD:275380 6/22 (27%)
leucine-rich repeat 135..158 CDD:275380 8/22 (36%)
leucine-rich repeat 159..182 CDD:275380 5/22 (23%)
leucine-rich repeat 183..206 CDD:275380 10/22 (45%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..254 CDD:275380 7/22 (32%)
leucine-rich repeat 255..278 CDD:275380 4/9 (44%)
PCC 259..>339 CDD:188093 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

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