DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and Flrt3

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001119763.1 Gene:Flrt3 / 366205 RGDID:1566005 Length:649 Species:Rattus norvegicus


Alignment Length:575 Identity:127/575 - (22%)
Similarity:209/575 - (36%) Gaps:193/575 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPGSLLLLIFSFSP----RLSCLQLSKCNNTEVTLIRKTELLTSLTL---SNCTLPHVENGFFVR 61
            |.|:.:.|.|..:|    ..||..:.:|:...:....::  |||:.:   .:.|..:::|.    
  Rat    10 LIGTKIGLFFQVAPLSVMAKSCPSVCRCDAGFIYCNDRS--LTSIPVGIPEDATTLYLQNN---- 68

  Fly    62 FDHLLHLELQHSGL-SDLDDFSLNGLTKLQYLSLSHNNL----SSLRSWSSEPLGALTNLDLSHN 121
                   ::.:.|: ||     |..|.|:|.:.|.||:|    ::|..:..|       |.|..|
  Rat    69 -------QINNVGIPSD-----LKNLLKVQRIYLYHNSLDEFPTNLPKYVKE-------LHLQEN 114

  Fly   122 MLSKLSVKSFEQYPQLQQLDLRYNRIS--QIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHR 184
            .:..::..|..:.|.|::|.|..|.:|  .||..:|...::|:.|:|:.|.|:.|.|    ||.|
  Rat   115 NIRTITYDSLSKIPYLEELHLDDNSVSAVSIEEGAFRDSNYLRLLFLSRNHLSTIPG----GLPR 175

  Fly   185 -LSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEP 248
             :..|.|..|||..|...|....|.|:.|.||.|||::      .||...|..||          
  Rat   176 TIEELRLDDNRISTISSPSLHGLTSLKRLVLDGNLLNN------HGLGDKVFFNL---------- 224

  Fly   249 FVFSKNFELQDLDLSYNNIT--KLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDIS 311
                  ..|.:|.|..|::|  .:|   |.| .||.:|.:..|:::::...:...|..|.:||:|
  Rat   225 ------VNLTELSLVRNSLTAAPVN---LPG-TSLRKLYLQDNHINRVPPNAFSYLRQLYRLDMS 279

  Fly   312 FNLLTTLPDNLFHFNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSV 376
            .|.|:.||..:|.....:.::||.||.                                      
  Rat   280 NNNLSNLPQGIFDDLDNITQLILRNNP-------------------------------------- 306

  Fly   377 NRFTLYVDLSSNRLKSLNLSSLLHFRYINLADNNWSC----NWLVANLVQKLPNSVN----FARP 433
                                              |.|    .| |.:.:|.||..||    ..:.
  Rat   307 ----------------------------------WYCGCKMKW-VRDWLQSLPVKVNVRGLMCQA 336

  Fly   434 WTVINNLSENTTNVEGIDCIEGGTNRSIILLDVSGVPQPKSDNCDCVVAYDETNPSPPPLTW--- 495
            ...:..::....:.|..||.:.|...::.:  .:.:|.         .||......|.|:|.   
  Rat   337 PEKVRGMAIKDLSAELFDCKDSGIVSTVQI--TTAIPN---------TAYPAQGQWPAPVTKQPD 390

  Fly   496 ---PKIPTDR----FDSRSVII--------------WMLVAIAIAFSGLR--WLR 527
               ||:..|:    ..||..|:              |.|   |:..:.||  ||:
  Rat   391 IKNPKLTKDQRTTGSPSRKTILITVKSVTPDTIHISWRL---ALPMTALRLSWLK 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 87/328 (27%)
leucine-rich repeat 41..64 CDD:275380 5/25 (20%)
leucine-rich repeat 65..88 CDD:275380 5/23 (22%)
leucine-rich repeat 89..112 CDD:275380 7/26 (27%)
leucine-rich repeat 113..136 CDD:275380 4/22 (18%)
leucine-rich repeat 137..160 CDD:275380 8/24 (33%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..232 CDD:275380 9/22 (41%)
leucine-rich repeat 233..256 CDD:275380 3/22 (14%)
leucine-rich repeat 257..280 CDD:275380 8/24 (33%)
leucine-rich repeat 281..304 CDD:275380 4/22 (18%)
leucine-rich repeat 305..328 CDD:275380 9/22 (41%)
Flrt3NP_001119763.1 LRRNT 31..61 CDD:214470 5/31 (16%)
Interaction with ADGRL3. /evidence=ECO:0000250|UniProtKB:Q9NZU0 38..67 4/30 (13%)
LRR 1. /evidence=ECO:0000255 59..80 5/36 (14%)
LRR <61..308 CDD:443914 84/371 (23%)
leucine-rich repeat 61..84 CDD:275378 7/38 (18%)
LRR 2. /evidence=ECO:0000255 84..104 7/19 (37%)
leucine-rich repeat 85..104 CDD:275380 6/18 (33%)
LRR 3. /evidence=ECO:0000255 105..126 5/27 (19%)
leucine-rich repeat 106..129 CDD:275380 5/29 (17%)
LRR 4. /evidence=ECO:0000255 129..150 7/20 (35%)
leucine-rich repeat 130..155 CDD:275380 8/24 (33%)
LRR 5. /evidence=ECO:0000255 155..176 9/24 (38%)
leucine-rich repeat 156..176 CDD:275380 9/23 (39%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
LRR 6. /evidence=ECO:0000255 177..197 7/19 (37%)
LRR 7. /evidence=ECO:0000255 200..220 9/25 (36%)
leucine-rich repeat 201..226 CDD:275380 12/46 (26%)
LRR 8. /evidence=ECO:0000255 226..247 8/24 (33%)
leucine-rich repeat 227..248 CDD:275380 8/24 (33%)
LRR 9. /evidence=ECO:0000255 248..269 4/20 (20%)
leucine-rich repeat 249..272 CDD:275380 4/22 (18%)
LRR 10. /evidence=ECO:0000255 272..293 9/20 (45%)
leucine-rich repeat 273..296 CDD:275380 9/22 (41%)
PCC 277..>349 CDD:188093 20/144 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..405 6/26 (23%)
FN3 413..478 CDD:473895 7/33 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 629..649
Blue background indicates that the domain is not in the aligned region.

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