DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and Kera

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001101557.1 Gene:Kera / 314771 RGDID:1305816 Length:351 Species:Rattus norvegicus


Alignment Length:275 Identity:73/275 - (26%)
Similarity:128/275 - (46%) Gaps:33/275 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQ--IENDSFDGLSHLKHLYLNGNQLAHIDGSF 178
            |.|.:|::..:..|.||...||:.::|..|:|:.  ||..:...|..|..|:|..|:|..:....
  Rat    77 LYLENNLIETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPL 141

  Fly   179 FRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLL--SSLQFLSQRGLARLVHLNLSSN 241
            .|.|.:   |.|..|::..|...:|.:..:|..|.|..|.|  ::.|..:.:||..|:.||::.|
  Rat   142 PRSLEQ---LQLARNKVSSIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKN 203

  Fly   242 LLQKLEPFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLDS----L 302
            .|:.:.|.:.:...:   |.|..|:|..:.:...:.:..:..|.::||   |:.|..|.|    :
  Rat   204 ALRNMPPRLPANTMQ---LFLDNNSIEGIPENYFNVIPKVAFLRLNHN---KLSDAGLPSRGFDV 262

  Fly   303 IALLQLDISFNLLTTLPDNLFHFNTQLEEIILANNKIEEIS------SQMMFNQN------HLRY 355
            .::|.|.:|.|.||..|    ..|..|:.:.|.:|||:.::      |.:...|:      .|.|
  Rat   263 SSILDLQLSHNQLTNFP----RINANLQHLHLDHNKIKNVNMSVICPSTLRAGQDAFLHGPQLSY 323

  Fly   356 IKLSGNAISDAAFLD 370
            ::|.||.|.....:|
  Rat   324 LRLDGNEIKPPIPMD 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 61/229 (27%)
leucine-rich repeat 41..64 CDD:275380
leucine-rich repeat 65..88 CDD:275380
leucine-rich repeat 89..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380 6/19 (32%)
leucine-rich repeat 137..160 CDD:275380 7/24 (29%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..208 CDD:275380 5/22 (23%)
leucine-rich repeat 209..232 CDD:275380 8/24 (33%)
leucine-rich repeat 233..256 CDD:275380 6/22 (27%)
leucine-rich repeat 257..280 CDD:275380 4/22 (18%)
leucine-rich repeat 281..304 CDD:275380 7/26 (27%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
KeraNP_001101557.1 PRK15370 16..>298 CDD:185268 64/233 (27%)
leucine-rich repeat 74..97 CDD:275380 6/19 (32%)
leucine-rich repeat 98..123 CDD:275380 7/24 (29%)
leucine-rich repeat 124..144 CDD:275380 5/19 (26%)
leucine-rich repeat 145..168 CDD:275380 6/25 (24%)
leucine-rich repeat 169..194 CDD:275380 8/24 (33%)
leucine-rich repeat 195..218 CDD:275380 6/22 (27%)
leucine-rich repeat 219..239 CDD:275380 4/19 (21%)
leucine-rich repeat 240..265 CDD:275380 7/27 (26%)
LRR_8 268..331 CDD:404697 19/66 (29%)
leucine-rich repeat 285..320 CDD:275380 7/34 (21%)
leucine-rich repeat 321..342 CDD:275380 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

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