DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18095 and Dcn

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_063119176.1 Gene:Dcn / 29139 RGDID:61895 Length:384 Species:Rattus norvegicus


Alignment Length:393 Identity:105/393 - (26%)
Similarity:168/393 - (42%) Gaps:56/393 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TEVTLIRKTELLTSLTLSNCTLPHVENGFFVRFDHLLHLELQHSGLSDLD-DFSLNGLTKLQYLS 93
            |..|.::.|.:|..|...:...|..:.|.   ||.:  ||.:.||:...| |..|  ::...|..
  Rat    26 THETTMKATLVLFLLAQVSWAGPFEQRGL---FDFM--LEDEASGIIPYDPDNPL--ISMCPYRC 83

  Fly    94 LSHNNLSSLRSWSSEPLGALTNLDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGL 158
            ..|     ||......||           |.|:   .:|..|....|||:.|:|::|:..:|..|
  Rat    84 QCH-----LRVVQCSDLG-----------LDKV---PWEFPPDTTLLDLQNNKITEIKEGAFKNL 129

  Fly   159 SHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQ 223
            ..|..|.|..|:::.|....|:.|.:|..|.|..|.::  |:......| |:.|||..|.::.|:
  Rat   130 KDLHTLILVNNKISKISPEAFKPLVKLERLYLSKNHLK--ELPEKLPKT-LQELRLHDNEITKLK 191

  Fly   224 FLSQRGLARLVHLNLSSNLLQK--LEPFVFSKNFELQDL-DLSYNNITKLNKEAL-SGL-DSLER 283
            .....||.|::.:.|..|.|:.  :|      |..||.: .|.|..|:..|..|: .|| .|:..
  Rat   192 KSVFNGLNRMIVIELGGNPLKNSGIE------NGALQGMKGLGYIRISDTNITAIPQGLPTSISE 250

  Fly   284 LNISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNLFHFNTQLEEIILANNKIEEISSQMMF 348
            |::..|.:.|:...||..:..|.:|.:|||.:|.:.:........|.|:.|.|||:..:.:.:. 
  Rat   251 LHLDGNKIAKVDAASLKGMSNLSKLGLSFNSITVVENGSLANVPHLRELHLDNNKLLRVPAGLA- 314

  Fly   349 NQNHLRYIKLSGNAISDAAFLDRLSPSV-NRFTLY--VDLSSNRLKSLNLSSLLHFRYINLADNN 410
            ...:::.:.|..|.||:....|...||. .|.|.|  |.|.||.:           ||..:..:.
  Rat   315 QHKYVQVVYLHNNNISEVGQHDFCLPSYQTRKTSYTAVSLYSNPV-----------RYWQIHPHT 368

  Fly   411 WSC 413
            :.|
  Rat   369 FRC 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 86/313 (27%)
leucine-rich repeat 41..64 CDD:275380 5/22 (23%)
leucine-rich repeat 65..88 CDD:275380 7/23 (30%)
leucine-rich repeat 89..112 CDD:275380 5/22 (23%)
leucine-rich repeat 113..136 CDD:275380 3/22 (14%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..208 CDD:275380 5/22 (23%)
leucine-rich repeat 209..232 CDD:275380 8/22 (36%)
leucine-rich repeat 233..256 CDD:275380 5/24 (21%)
leucine-rich repeat 257..280 CDD:275380 9/25 (36%)
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..328 CDD:275380 6/22 (27%)
DcnXP_063119176.1 None

Return to query results.
Submit another query.