| Sequence 1: | NP_001188805.1 | Gene: | CG18095 / 34823 | FlyBaseID: | FBgn0028872 | Length: | 564 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_775450.2 | Gene: | Lgr4 / 286994 | RGDID: | 628615 | Length: | 951 | Species: | Rattus norvegicus |
| Alignment Length: | 409 | Identity: | 111/409 - (27%) |
|---|---|---|---|
| Similarity: | 171/409 - (41%) | Gaps: | 80/409 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 108 EPLGALTN-LDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQL 171
Fly 172 AHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHL 236
Fly 237 NLSSNLLQKLEPFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLDS 301
Fly 302 LIALLQLDISFNLLTTLPDNLFHFN---------------------------------------- 326
Fly 327 -------TQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVD 384
Fly 385 LSSNR-----LKSLNLSSLLHFRYINLADNNWSCNWLVANLVQKLPNSVNFARPWTVIN---NLS 441
Fly 442 ENTT-NVEGIDCIEGGTNR 459 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG18095 | NP_001188805.1 | LRR | 22..>338 | CDD:443914 | 77/277 (28%) |
| leucine-rich repeat | 41..64 | CDD:275380 | |||
| leucine-rich repeat | 65..88 | CDD:275380 | |||
| leucine-rich repeat | 89..112 | CDD:275380 | 2/3 (67%) | ||
| leucine-rich repeat | 113..136 | CDD:275380 | 7/23 (30%) | ||
| leucine-rich repeat | 137..160 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 161..184 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 185..208 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 209..232 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 233..256 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 257..280 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 281..304 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 305..328 | CDD:275380 | 7/69 (10%) | ||
| Lgr4 | NP_775450.2 | LRR | <39..342 | CDD:443914 | 80/289 (28%) |
| LRR 1 | 58..79 | 7/20 (35%) | |||
| leucine-rich repeat | 59..82 | CDD:275380 | 7/22 (32%) | ||
| LRR 2 | 82..103 | 6/20 (30%) | |||
| leucine-rich repeat | 83..106 | CDD:275380 | 8/22 (36%) | ||
| LRR 3 | 106..127 | 7/20 (35%) | |||
| leucine-rich repeat | 107..130 | CDD:275380 | 9/22 (41%) | ||
| LRR 4 | 130..151 | 9/20 (45%) | |||
| leucine-rich repeat | 131..154 | CDD:275380 | 10/22 (45%) | ||
| LRR 5 | 154..177 | 7/22 (32%) | |||
| leucine-rich repeat | 155..178 | CDD:275380 | 8/22 (36%) | ||
| LRR 6 | 178..199 | 6/20 (30%) | |||
| leucine-rich repeat | 179..202 | CDD:275380 | 6/22 (27%) | ||
| LRR 7 | 202..223 | 6/20 (30%) | |||
| leucine-rich repeat | 203..226 | CDD:275380 | 8/22 (36%) | ||
| LRR 8 | 226..247 | 5/21 (24%) | |||
| leucine-rich repeat | 227..249 | CDD:275380 | 6/22 (27%) | ||
| LRR 9 | 249..270 | 6/20 (30%) | |||
| leucine-rich repeat | 250..273 | CDD:275380 | 7/22 (32%) | ||
| LRR 10 | 273..294 | 0/20 (0%) | |||
| leucine-rich repeat | 274..295 | CDD:275380 | 0/20 (0%) | ||
| LRR 11 | 320..341 | 6/20 (30%) | |||
| leucine-rich repeat | 321..344 | CDD:275378 | 8/22 (36%) | ||
| LRR 12 | 344..365 | 10/27 (37%) | |||
| LRR_8 | 345..401 | CDD:404697 | 17/72 (24%) | ||
| leucine-rich repeat | 345..366 | CDD:275378 | 10/27 (37%) | ||
| LRR 13 | 366..387 | 3/20 (15%) | |||
| leucine-rich repeat | 367..390 | CDD:275378 | 4/22 (18%) | ||
| LRR_8 | 389..444 | CDD:404697 | 15/65 (23%) | ||
| LRR 14 | 390..411 | 6/31 (19%) | |||
| leucine-rich repeat | 391..414 | CDD:275378 | 7/33 (21%) | ||
| LRR 15 | 414..435 | 6/24 (25%) | |||
| leucine-rich repeat | 415..427 | CDD:275378 | 2/11 (18%) | ||
| leucine-rich repeat | 436..461 | CDD:275380 | 1/3 (33%) | ||
| 7tmA_LGR4 | 539..812 | CDD:320483 | |||
| TM helix 1 | 540..566 | CDD:320483 | |||
| TM helix 2 | 573..598 | CDD:320483 | |||
| TM helix 3 | 618..648 | CDD:320483 | |||
| TM helix 4 | 660..682 | CDD:320483 | |||
| TM helix 5 | 702..731 | CDD:320483 | |||
| TM helix 6 | 740..770 | CDD:320483 | |||
| TM helix 7 | 780..805 | CDD:320483 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||