DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and Bgn

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_058783.1 Gene:Bgn / 25181 RGDID:2207 Length:369 Species:Rattus norvegicus


Alignment Length:362 Identity:87/362 - (24%)
Similarity:147/362 - (40%) Gaps:68/362 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IRKTELLTSLTLSNCTLPHVENGF--FVRFDHLLHLELQHSGLSDLDDFSLNGLTKLQYLSLSHN 97
            :|...|||.|...:..||..:.||  |...|.||.:..:.:..||    :.:|:..|..|:.:.:
  Rat     1 MRPLWLLTLLLALSQALPFEQKGFWDFTLDDGLLMMNDEEASGSD----TTSGVPDLDSLTPTFS 61

  Fly    98 NLSSLRSWSSEPLGALTNLDLSHNMLSKLSVKSF--EQYPQLQQLDLRYNRISQIENDSFDGLSH 160
            .:.        |.|...:|.:.  ..|.|.:|:.  |..|....|||:.|.||::..|.|.||.|
  Rat    62 AMC--------PFGCHCHLRVV--QCSDLGLKTVPKEISPDTTLLDLQNNDISELRKDDFKGLQH 116

  Fly   161 LKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFL 225
            |..|.|..|:::.|....|..|.:|..|.:..|              ||  :.:..||.||    
  Rat   117 LYALVLVNNKISKIHEKAFSPLRKLQKLYISKN--------------HL--VEIPPNLPSS---- 161

  Fly   226 SQRGLARLVHLNLSSNLLQKLEPFVFSKNFELQDLDLSYN-----------------NITKLNKE 273
                   ||.|.:..|.::|:...|||....:..:::..|                 |..::::.
  Rat   162 -------LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEA 219

  Fly   274 ALSGL-----DSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNLFHFNTQLEEII 333
            .|:|:     ::|..|::.||.:..|..|.|.....|.:|.:..|.:..:.:....|...|.|:.
  Rat   220 KLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELH 284

  Fly   334 LANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLD 370
            |.|||:..:.:.:. :...|:.:.|..|.|:.....|
  Rat   285 LDNNKLSRVPAGLP-DLKLLQVVYLHSNNITKVGIND 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 80/328 (24%)
leucine-rich repeat 41..64 CDD:275380 8/24 (33%)
leucine-rich repeat 65..88 CDD:275380 5/22 (23%)
leucine-rich repeat 89..112 CDD:275380 3/22 (14%)
leucine-rich repeat 113..136 CDD:275380 5/24 (21%)
leucine-rich repeat 137..160 CDD:275380 10/22 (45%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..208 CDD:275380 3/22 (14%)
leucine-rich repeat 209..232 CDD:275380 5/22 (23%)
leucine-rich repeat 233..256 CDD:275380 8/22 (36%)
leucine-rich repeat 257..280 CDD:275380 4/44 (9%)
leucine-rich repeat 281..304 CDD:275380 7/22 (32%)
leucine-rich repeat 305..328 CDD:275380 4/22 (18%)
BgnNP_058783.1 LRRNT 63..95 CDD:214470 8/41 (20%)
leucine-rich repeat 72..92 CDD:275380 5/21 (24%)
LRR 1 83..103 7/19 (37%)
LRR 93..>314 CDD:443914 59/248 (24%)
leucine-rich repeat 93..116 CDD:275380 10/22 (45%)
LRR 2 104..127 10/22 (45%)
leucine-rich repeat 117..140 CDD:275380 7/22 (32%)
LRR 3 128..151 6/36 (17%)
leucine-rich repeat 141..161 CDD:275380 7/35 (20%)
LRR 4 152..172 8/30 (27%)
leucine-rich repeat 162..185 CDD:275380 8/22 (36%)
LRR 5 173..196 5/22 (23%)
leucine-rich repeat 186..209 CDD:275380 1/22 (5%)
LRR 6 197..221 1/23 (4%)
leucine-rich repeat 211..232 CDD:275380 3/20 (15%)
LRR 7 222..242 5/19 (26%)
leucine-rich repeat 234..255 CDD:275380 6/20 (30%)
LRR 8 243..266 6/22 (27%)
leucine-rich repeat 256..279 CDD:275380 4/22 (18%)
LRR 9 267..290 6/22 (27%)
LRR 10 291..313 3/22 (14%)
leucine-rich repeat 303..322 CDD:275380 5/18 (28%)
LRR 11 314..343 1/7 (14%)
LRR 12 344..369
Blue background indicates that the domain is not in the aligned region.

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