DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18095 and FLRT3

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_037413.1 Gene:FLRT3 / 23767 HGNCID:3762 Length:649 Species:Homo sapiens


Alignment Length:577 Identity:125/577 - (21%)
Similarity:211/577 - (36%) Gaps:197/577 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPGSLLLLIFSFSP----RLSCLQLSKCNNTEVTLIRKTELLTSLTL---SNCTLPHVENGFFVR 61
            |.|:.:.|....:|    ..||..:.:|:...:..  ....|||:..   .:.|..:::|.    
Human    10 LIGTKIGLFLQVAPLSVMAKSCPSVCRCDAGFIYC--NDRFLTSIPTGIPEDATTLYLQNN---- 68

  Fly    62 FDHLLHLELQHSGL-SDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSEPLGALTNLDLSHNMLSK 125
                   ::.::|: ||     |..|.|::.:.|.||:|....          |||         
Human    69 -------QINNAGIPSD-----LKNLLKVERIYLYHNSLDEFP----------TNL--------- 102

  Fly   126 LSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSL 190
                  .:|  :::|.|:.|.|..|..||...:.:|:.|:|:.|.::.:.               
Human   103 ------PKY--VKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSAVS--------------- 144

  Fly   191 QHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPFVFSKNF 255
                   ||..:|..:.:||.|.|.:|.||::.:    ||.|.:                     
Human   145 -------IEEGAFRDSNYLRLLFLSRNHLSTIPW----GLPRTI--------------------- 177

  Fly   256 ELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDK--IYDESLDSLIALLQLDISFNLLTTL 318
              ::|.|..|.|:.::..:|.||.||:||.:..|.::.  :.|:...:|:.|.:|.:..|.||..
Human   178 --EELRLDDNRISTISSPSLQGLTSLKRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAA 240

  Fly   319 PDNLFHFNTQLEEIILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYV 383
            |.||  ..|.|.::.|.:|.|..:..                ||.|....|.||           
Human   241 PVNL--PGTNLRKLYLQDNHINRVPP----------------NAFSYLRQLYRL----------- 276

  Fly   384 DLSSNRLKSL---------NLSSLLHFRYINLADNNWSC----NWLVANLVQKLPNSVN----FA 431
            |:|:|.|.:|         |::.|:      |.:|.|.|    .| |.:.:|.||..||    ..
Human   277 DMSNNNLSNLPQGIFDDLDNITQLI------LRNNPWYCGCKMKW-VRDWLQSLPVKVNVRGLMC 334

  Fly   432 RPWTVINNLSENTTNVEGIDCIEGGTNRSIILLDVSGVPQPKSDNCDCVVAYDETNPSPPPLTW- 495
            :....:..::....|.|..||.:.|...:|.:  .:.:|.         ..|......|.|:|. 
Human   335 QAPEKVRGMAIKDLNAELFDCKDSGIVSTIQI--TTAIPN---------TVYPAQGQWPAPVTKQ 388

  Fly   496 -----PKIPTDR------------FDSRSV------IIWMLVAIAIAFSGLR--WLR 527
                 ||:..|.            ...:||      |.|.|   |:..:.||  ||:
Human   389 PDIKNPKLTKDHQTTGSPSRKTITITVKSVTSDTIHISWKL---ALPMTALRLSWLK 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380 5/25 (20%)
LRR_8 64..123 CDD:290566 13/59 (22%)
leucine-rich repeat 65..88 CDD:275380 5/23 (22%)
leucine-rich repeat 89..112 CDD:275380 4/22 (18%)
leucine-rich repeat 113..136 CDD:275380 4/22 (18%)
LRR_RI 115..384 CDD:238064 60/270 (22%)
LRR_8 135..195 CDD:290566 11/59 (19%)
leucine-rich repeat 137..160 CDD:275380 7/22 (32%)
leucine-rich repeat 161..184 CDD:275380 4/22 (18%)
LRR_8 184..243 CDD:290566 13/58 (22%)
leucine-rich repeat 185..208 CDD:275380 3/22 (14%)
leucine-rich repeat 209..232 CDD:275380 9/22 (41%)
LRR_8 232..289 CDD:290566 12/56 (21%)
leucine-rich repeat 233..256 CDD:275380 0/22 (0%)
leucine-rich repeat 257..280 CDD:275380 7/22 (32%)
LRR_8 280..339 CDD:290566 19/60 (32%)
leucine-rich repeat 281..304 CDD:275380 6/24 (25%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
FLRT3NP_037413.1 LRRNT 31..61 CDD:214470 5/31 (16%)
Interaction with ADGRL3. /evidence=ECO:0000269|PubMed:26235030 38..67 4/30 (13%)
LRR 1. /evidence=ECO:0000255 59..80 5/36 (14%)
leucine-rich repeat 61..84 CDD:275378 7/38 (18%)
LRR 2. /evidence=ECO:0000255 84..104 8/44 (18%)
leucine-rich repeat 85..104 CDD:275380 7/43 (16%)
LRR 3. /evidence=ECO:0000255 105..126 8/22 (36%)
LRR_8 106..166 CDD:290566 19/81 (23%)
leucine-rich repeat 106..129 CDD:275380 7/22 (32%)
LRR_RI <120..259 CDD:238064 45/189 (24%)
LRR 4. /evidence=ECO:0000255 129..150 6/42 (14%)
leucine-rich repeat 130..155 CDD:275380 7/46 (15%)
LRR 5. /evidence=ECO:0000255 155..175 9/23 (39%)
leucine-rich repeat 156..176 CDD:275380 9/23 (39%)
LRR_8 175..237 CDD:290566 18/84 (21%)
LRR 6. /evidence=ECO:0000255 176..197 5/43 (12%)
leucine-rich repeat 177..200 CDD:275380 7/45 (16%)
LRR 7. /evidence=ECO:0000255 200..220 6/19 (32%)
leucine-rich repeat 201..226 CDD:275380 6/24 (25%)
LRR 8. /evidence=ECO:0000255 226..247 8/22 (36%)
leucine-rich repeat 227..248 CDD:275380 8/22 (36%)
LRR_8 247..306 CDD:290566 19/91 (21%)
LRR_4 247..287 CDD:289563 15/66 (23%)
LRR 9. /evidence=ECO:0000255 248..269 6/36 (17%)
leucine-rich repeat 249..272 CDD:275380 7/38 (18%)
LRR 10. /evidence=ECO:0000255 272..293 8/31 (26%)
leucine-rich repeat 273..296 CDD:275380 8/33 (24%)
LRRCT 305..356 CDD:214507 13/51 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..407 3/19 (16%)
fn3 413..478 CDD:278470 10/33 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 622..649
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45712
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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