DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and Lrrc26

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_666229.1 Gene:Lrrc26 / 227618 MGIID:2385129 Length:331 Species:Mus musculus


Alignment Length:225 Identity:65/225 - (28%)
Similarity:89/225 - (39%) Gaps:39/225 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 SWSSEPLGALTNLDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNG 168
            ||.      :.:|.|.||.:|.|...:|.....|..||||.||:..:...:|.||..|:.|.|:.
Mouse    70 SWQ------VRSLLLDHNRVSALPPGAFANAGALLYLDLRENRLRSVHARAFWGLGVLQWLDLSS 128

  Fly   169 NQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARL 233
            |||..:....|..|..||.|||..||:..:|.........||.|.|..|.||:::......|..|
Mouse   129 NQLETLPPGTFAPLRALSFLSLAGNRLALLEPSILGPLPLLRVLSLQDNSLSAIEAGLLNNLPAL 193

  Fly   234 VHLNLSSNLLQKLEPFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDES 298
            ..|.|..|        .::.|..|:.|      .|.|.|......::                |:
Mouse   194 DVLRLHGN--------PWTCNCALRPL------CTWLRKHPRPASET----------------ET 228

  Fly   299 LDSLIALLQLDISFNLLTTLPDNLFHFNTQ 328
            |..:...||   :.:|||..||..|...||
Mouse   229 LLCVSPRLQ---TLSLLTAFPDAAFKQCTQ 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380
LRR_8 64..123 CDD:290566 6/18 (33%)
leucine-rich repeat 65..88 CDD:275380
leucine-rich repeat 89..112 CDD:275380 2/7 (29%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
LRR_RI 115..384 CDD:238064 63/214 (29%)
LRR_8 135..195 CDD:290566 24/59 (41%)
leucine-rich repeat 137..160 CDD:275380 10/22 (45%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
LRR_8 184..243 CDD:290566 20/58 (34%)
leucine-rich repeat 185..208 CDD:275380 8/22 (36%)
leucine-rich repeat 209..232 CDD:275380 8/22 (36%)
LRR_8 232..289 CDD:290566 10/56 (18%)
leucine-rich repeat 233..256 CDD:275380 5/22 (23%)
leucine-rich repeat 257..280 CDD:275380 5/22 (23%)
LRR_8 280..339 CDD:290566 12/49 (24%)
leucine-rich repeat 281..304 CDD:275380 2/22 (9%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
Lrrc26NP_666229.1 LRR_8 72..131 CDD:290566 21/64 (33%)
LRR 1 72..93 7/26 (27%)
leucine-rich repeat 73..96 CDD:275380 7/22 (32%)
LRR 2 96..117 8/20 (40%)
leucine-rich repeat 97..120 CDD:275380 10/22 (45%)
LRR 118..141 CDD:197688 8/22 (36%)
LRR 3 120..141 7/20 (35%)
LRR_8 121..179 CDD:290566 21/57 (37%)
leucine-rich repeat 121..144 CDD:275380 8/22 (36%)
LRR 4 144..165 8/20 (40%)
leucine-rich repeat 145..168 CDD:275380 8/22 (36%)
LRR 5 168..191 7/22 (32%)
LRR_4 169..204 CDD:289563 12/42 (29%)
leucine-rich repeat 169..192 CDD:275380 8/22 (36%)
TPKR_C2 201..244 CDD:301599 13/75 (17%)
leucine-rich repeat 236..255 CDD:275380 8/21 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..331
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831224
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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