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Protein Alignment CG18095 and Chadl

DIOPT Version :9

Sequence 1:	NP_001188805.1	Gene:	CG18095 / 34823	FlyBaseID:	FBgn0028872	Length:	564	Species:	Drosophila melanogaster
Sequence 2:	XP_006520805.1	Gene:	Chadl / 214685	MGIID:	3036284	Length:	759	Species:	Mus musculus

Alignment Length:	616	Identity:	136/616 - (22%)
Similarity:	209/616 - (33%)	Gaps:	240/616 - (38%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 GSLLLLIFSFSPRLSCLQLSKCNNTEVTLIRKTEL------------------LTSLTLSNCTLP 52
            |.||||..: |.|||.|.....:.  :..:|:.||                  ||:|.|::..|.
Mouse   120 GRLLLLNLA-SNRLSTLPQEALDG--LGSLRRLELEGNMLEELRPGTFGALGSLTTLNLAHNALV 181

  Fly    53 HVENGFFVRFDHLLH---LELQHSGLSDLDDFSLNGLTKLQYLSLSHNNLSSL--------RSWS 106
            ::.   .:.|..||.   |:|.|:.||.|...:|.||..|:.|||.||.|.:|        ||.:
Mouse   182 YLP---AMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALSQARSLA 243

  Fly   107 SEPLG----------------ALTNLDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQI----- 150
            ...||                .|..|.|.|..|..|..::|...|:|..||||.|:::.:
Mouse   244 RLELGHNPLTYTGEEDGLALPGLRELALDHGSLQALGPRAFAHCPRLHTLDLRGNQLTTLPPLQV 308

  Fly   151 ----------------------------------------------------------------- 150

Mouse   309 PGQLRRLRLQGNPLWCACHARPLLEWLVRARVRSDGACRGPRRLRGEALDTLRPSDLRCPGDAAA 373

  Fly   151 ------------------------------------------------------------END-- 153
                                                                        .||
Mouse   374 GDGDGDEDEDRPAGPRAPPLRSPHGEAAWATPCPPACACVAETRHSTCDGRGLQAVPRGFPNDTQ 438

  Fly   154 ---------------SFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSF 203
                           :|.||.||..|:|....:|.::.....||.||..|.|.||::..:...:.
Mouse   439 LLDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSHNQLSGLSAAAL 503

  Fly   204 ESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPFVFSKNFELQDLDLSYNNIT 268
            |...:|..|.|:.|....:...:.|.|..||.|:|..|.:.:|.|...:....|:.|.||.|:||
Mouse   504 EGAPNLGYLYLEHNRFLRIPGTALRALPTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHIT 568

  Fly   269 KLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNLFH-FNTQLEEI 332
            :::..||.....||:|::..|.:.::...:|:.|.||.:|.:|.|.|..|||..|. ....|:::
Mouse   569 QVSPGALGPARELEKLHLDRNRLREVPTGALEGLPALKELQLSGNPLRALPDGAFQPVGRSLQQL 633

  Fly   333 ILANNKIEEISSQMMFNQNHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVDLSSNRLKS----L 393
            .|.::.:|:||.:           ..||           |...:.  :||  |..|:|:|    |
Mouse   634 FLNSSDLEQISPR-----------AFSG-----------LGKGLR--SLY--LHKNQLQSLPAPL 672

  Fly   394 NLSSLLHFRYINLADNNWSCN--------WL 416
            .||.|   ..::|:.|.:.|:        ||
Mouse   673 GLSGL---ELVDLSGNPFHCDCQLLPLHRWL 700

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.