DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and lron-11

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_491035.1 Gene:lron-11 / 171837 WormBaseID:WBGene00022129 Length:542 Species:Caenorhabditis elegans


Alignment Length:426 Identity:121/426 - (28%)
Similarity:199/426 - (46%) Gaps:64/426 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLIFSFSPRLSCLQLSKCNNTEVTLIRKTELLTSLTLSNCTLPHVENGFFVRFDHLLHLELQH 72
            :|:|:...|..:||....|| .|:.|.:.|...|.|:.:.                         
 Worm     5 VLILLVLVSGVISCQSGCKC-PTKTTAVCKGSSLRSIPIL------------------------- 43

  Fly    73 SGLSDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSEPLGALTNLD---LSHNMLSKLSVKSFEQY 134
                 ||       .:...|.||:|.:|.|   |::.|....||:   |.:|.::.||...|...
 Worm    44 -----LD-------PRTTVLDLSNNRISRL---SADELSLYPNLEQLILHNNSITHLSADVFSTL 93

  Fly   135 PQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIE 199
            |.|:.|||..|.:..:.|:.|..|.:||.|.::.|.: .:....|.||.:|.:||:..||:.|:.
 Worm    94 PSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDV-QLGPECFAGLSQLQTLSIADNRLSFLP 157

  Fly   200 MDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPFVFSKNFELQDLDLSY 264
            ....:..:.||:|.|..|.|.|:.......|..|..|.|..|||..||..:|....||:.||:|.
 Worm   158 PSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSE 222

  Fly   265 NNITKLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNLFHFNTQL 329
            |.|..:.:.||.||:.||.||:::|.:.::...:. ||.||..||:|.||..:|....|.....|
 Worm   223 NLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTW-SLPALKTLDLSSNLFVSLETASFDGLPAL 286

  Fly   330 EEIILANNK-IEEISSQMMFNQNHLRYIKLSGNA---ISDAAF--LDRLSPSVNRFTLYVDLSSN 388
            :.:.::::: ::.|........:.|.::.:|.:|   |..:||  :..||        ::|||:|
 Worm   287 QYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLS--------HLDLSNN 343

  Fly   389 RLKSLNLSSLL--HFRYINLADNNW--SCNWLVANL 420
            .|:.:....|.  :.|.::||:|:|  ||:..|:||
 Worm   344 ELRYVAPGMLQWPNIRNLHLANNDWHCSCDLRVSNL 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380 2/22 (9%)
LRR_8 64..123 CDD:290566 14/61 (23%)
leucine-rich repeat 65..88 CDD:275380 2/22 (9%)
leucine-rich repeat 89..112 CDD:275380 8/22 (36%)
leucine-rich repeat 113..136 CDD:275380 7/25 (28%)
LRR_RI 115..384 CDD:238064 83/277 (30%)
LRR_8 135..195 CDD:290566 20/59 (34%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
LRR_8 184..243 CDD:290566 18/58 (31%)
leucine-rich repeat 185..208 CDD:275380 6/22 (27%)
leucine-rich repeat 209..232 CDD:275380 8/22 (36%)
LRR_8 232..289 CDD:290566 24/56 (43%)
leucine-rich repeat 233..256 CDD:275380 9/22 (41%)
leucine-rich repeat 257..280 CDD:275380 10/22 (45%)
LRR_8 280..339 CDD:290566 17/59 (29%)
leucine-rich repeat 281..304 CDD:275380 7/22 (32%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
lron-11NP_491035.1 leucine-rich repeat 48..71 CDD:275380 8/25 (32%)
LRR_RI <50..177 CDD:238064 42/130 (32%)
LRR_8 70..130 CDD:290566 20/59 (34%)
leucine-rich repeat 72..95 CDD:275380 6/22 (27%)
leucine-rich repeat 96..119 CDD:275380 8/22 (36%)
LRR_8 118..177 CDD:290566 18/59 (31%)
leucine-rich repeat 120..142 CDD:275380 7/22 (32%)
LRR_RI <141..270 CDD:238064 46/129 (36%)
leucine-rich repeat 143..166 CDD:275380 6/22 (27%)
leucine-rich repeat 167..190 CDD:275380 8/22 (36%)
LRR_8 190..249 CDD:290566 25/58 (43%)
leucine-rich repeat 191..214 CDD:275380 9/22 (41%)
leucine-rich repeat 215..238 CDD:275380 10/22 (45%)
LRR_8 238..295 CDD:290566 17/57 (30%)
leucine-rich repeat 239..261 CDD:275380 7/22 (32%)
leucine-rich repeat 262..283 CDD:275380 8/20 (40%)
LRR_8 284..345 CDD:290566 14/68 (21%)
leucine-rich repeat 286..310 CDD:275380 2/23 (9%)
leucine-rich repeat 311..334 CDD:275380 6/22 (27%)
leucine-rich repeat 335..357 CDD:275380 8/29 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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