DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and slitrk5b

DIOPT Version :9

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002667367.2 Gene:slitrk5b / 100331252 ZFINID:ZDB-GENE-110408-55 Length:856 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 leucine-rich repeat 41..64 CDD:275380
LRR_8 64..123 CDD:290566
leucine-rich repeat 65..88 CDD:275380
leucine-rich repeat 89..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380
LRR_RI 115..384 CDD:238064
LRR_8 135..195 CDD:290566
leucine-rich repeat 137..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
LRR_8 184..243 CDD:290566
leucine-rich repeat 185..208 CDD:275380
leucine-rich repeat 209..232 CDD:275380
LRR_8 232..289 CDD:290566
leucine-rich repeat 233..256 CDD:275380
leucine-rich repeat 257..280 CDD:275380
LRR_8 280..339 CDD:290566
leucine-rich repeat 281..304 CDD:275380
leucine-rich repeat 305..328 CDD:275380
slitrk5bXP_002667367.2 LRR_8 79..136 CDD:290566
leucine-rich repeat 80..101 CDD:275380
LRR_RI <101..283 CDD:238064
leucine-rich repeat 102..125 CDD:275380
LRR_8 125..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..173 CDD:275380
LRR_8 172..230 CDD:290566
leucine-rich repeat 174..189 CDD:275380
leucine-rich repeat 197..221 CDD:275380
leucine-rich repeat 222..367 CDD:275380
LRRCT 230..>268 CDD:214507
leucine-rich repeat 368..420 CDD:275380
leucine-rich repeat 376..397 CDD:275380
LRR_8 419..479 CDD:290566
leucine-rich repeat 421..444 CDD:275380
LRR_4 444..482 CDD:289563
leucine-rich repeat 445..468 CDD:275380
leucine-rich repeat 469..488 CDD:275380
leucine-rich repeat 493..515 CDD:275380
leucine-rich repeat 516..540 CDD:275380
LRRCT 549..599 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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