DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and flrt3

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001116922.1 Gene:flrt3 / 100144692 XenbaseID:XB-GENE-490901 Length:648 Species:Xenopus tropicalis


Alignment Length:347 Identity:91/347 - (26%)
Similarity:150/347 - (43%) Gaps:74/347 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLIFSFSPRL----SCLQLSK-------CNNTEVTLIRKTELLTSLTLSNCTLPHVENGFFVRF 62
            |||:|..||:.    .|..:.:       ||:.::|.|      .|....:.|..:::|.     
 Frog    15 LLLLFRISPQYVNAKPCPSVCRCDGGFIYCNDRDLTSI------PSGIPDDATTLYLQNN----- 68

  Fly    63 DHLLHLELQHSGL-SDLDDFSLNGLTKLQYLSLSHNNLSSLRSWSSEPLGALTN---LDLSHNML 123
                  ::.::|: ||     |.||.|::.:.|..|:|...      |:....|   |.|..|.:
 Frog    69 ------QINNAGIPSD-----LRGLDKVERIYLYRNSLDEF------PINLPKNVKELHLQENNI 116

  Fly   124 SKLSVKSFEQYPQLQQLDLRYNRIS--QIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHR-L 185
            ..::..:..|.|.:::|.|..|.:|  .||:.:|.....|:.|:|:.|.|:.|..    ||.| :
 Frog   117 RTITYDALSQIPSIEELHLDDNSVSAVSIEDGAFRDNIFLRLLFLSRNHLSTIPW----GLPRTI 177

  Fly   186 SSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPFV 250
            ..|.|..|||..|...|.:..|:|:.|.||.|||::      .||...|.:||            
 Frog   178 EELRLDDNRISTIAEISLQDLTNLKRLVLDGNLLNN------NGLGERVFMNL------------ 224

  Fly   251 FSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLL 315
                ..|.:|.|..|::|. ....|.| .:|.:|.:..|:::.:...:...|..|.:||:|.|.:
 Frog   225 ----INLTELSLVRNSLTS-PPANLPG-TNLRKLYLQENHMNYVPPNAFADLTQLYRLDMSNNNI 283

  Fly   316 TTLPDNLFHFNTQLEEIILANN 337
            |.||..:|.....|.::.|.||
 Frog   284 TALPQGIFDDLDNLTQLFLRNN 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 84/330 (25%)
leucine-rich repeat 41..64 CDD:275380 3/22 (14%)
leucine-rich repeat 65..88 CDD:275380 6/23 (26%)
leucine-rich repeat 89..112 CDD:275380 4/22 (18%)
leucine-rich repeat 113..136 CDD:275380 5/25 (20%)
leucine-rich repeat 137..160 CDD:275380 7/24 (29%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..232 CDD:275380 9/22 (41%)
leucine-rich repeat 233..256 CDD:275380 3/22 (14%)
leucine-rich repeat 257..280 CDD:275380 7/22 (32%)
leucine-rich repeat 281..304 CDD:275380 4/22 (18%)
leucine-rich repeat 305..328 CDD:275380 9/22 (41%)
flrt3NP_001116922.1 LRRNT 30..61 CDD:214470 6/36 (17%)
LRR 1. /evidence=ECO:0000255 58..82 6/39 (15%)
LRR <61..>305 CDD:443914 77/293 (26%)
leucine-rich repeat 61..84 CDD:275380 8/38 (21%)
LRR 2. /evidence=ECO:0000255 83..105 5/27 (19%)
leucine-rich repeat 85..105 CDD:275380 4/25 (16%)
leucine-rich repeat 106..129 CDD:275380 4/22 (18%)
LRR 3. /evidence=ECO:0000255 107..126 3/18 (17%)
LRR 4. /evidence=ECO:0000255 127..152 8/24 (33%)
leucine-rich repeat 130..155 CDD:275380 7/24 (29%)
LRR 5. /evidence=ECO:0000255 154..179 9/28 (32%)
leucine-rich repeat 156..176 CDD:275380 8/23 (35%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
LRR 6. /evidence=ECO:0000255 181..197 6/15 (40%)
LRR 7. /evidence=ECO:0000255 198..223 11/30 (37%)
leucine-rich repeat 201..226 CDD:275380 12/46 (26%)
LRR 8. /evidence=ECO:0000255 225..246 6/21 (29%)
leucine-rich repeat 227..248 CDD:275380 7/22 (32%)
LRR 9. /evidence=ECO:0000255 247..269 3/21 (14%)
leucine-rich repeat 249..272 CDD:275380 4/22 (18%)
LRR 10. /evidence=ECO:0000255 270..293 10/22 (45%)
leucine-rich repeat 273..296 CDD:275380 9/22 (41%)
PCC 277..>354 CDD:188093 11/29 (38%)
FN3 413..476 CDD:214495
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 624..648
Blue background indicates that the domain is not in the aligned region.

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