DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and FAA2

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_010931.3 Gene:FAA2 / 856734 SGDID:S000000817 Length:744 Species:Saccharomyces cerevisiae


Alignment Length:645 Identity:146/645 - (22%)
Similarity:252/645 - (39%) Gaps:138/645 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 VGILAFNCPEWFFAEFGALRAGAVVAGVYPS----------NSAEA---------VHHVLAT--- 139
            |.||:.|.|||...:............:|.:          |..||         ::|||..   
Yeast   166 VAILSHNNPEWILTDLACQAYSLTNTALYETLGPNTSEYILNLTEAPILIFAKSNMYHVLKMVPD 230

  Fly   140 ---GESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQ-TFSSE 200
               ..:.||:  |.....:||.:.|.|..:|.                     ..|.|: ||.|.
Yeast   231 MKFVNTLVCM--DELTHDELRMLNESLLPVKC---------------------NSLNEKITFFSL 272

  Fly   201 LKEELLARESRIRA-----NECAMLIFTSGTVGMPKAVMLSHDNL------VFDTKSAAAHMQDI 254
            .:.|.:...::|.|     :....:.|||||.|:||.|.:||.|:      .|.|.......::.
Yeast   273 EQVEQVGCFNKIPAIPPTPDSLYTISFTSGTTGLPKGVEMSHRNIASGIAFAFSTFRIPPDKRNQ 337

  Fly   255 QVGKESFVSYLPLSHVAAQI---FDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPR 316
            |:..   :.:|||:|:..::   :|:.:|..    :.|..|.. ...|::..:..:|..:..|||
Yeast   338 QLYD---MCFLPLAHIFERMVIAYDLAIGFG----IGFLHKPD-PTVLVEDLKILKPYAVALVPR 394

  Fly   317 VFEKLQERLVAAEAKA---RPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPI 378
            :..:.:..:..|..|:   |..:..:|....|     :.|...|...||.....|...  ::..|
Yeast   395 ILTRFEAGIKNALDKSTVQRNVANTILDSKSA-----RFTARGGPDKSIMNFLVYHRV--LIDKI 452

  Fly   379 REMIGVDNCRVFFTGGAPTSEELKQFF-LGLDIALGECYGMSETSGAITLN----VDISNLYSAG 438
            |:.:|:.|.....||.||.|::...|. ..|||.:.:.||::||...:.|:    .|:.:..:.|
Yeast   453 RDSLGLSNNSFIITGSAPISKDTLLFLRSALDIGIRQGYGLTETFAGVCLSEPFEKDVGSCGAIG 517

  Fly   439 QACE----GVTLKIHEPDCNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKG 499
            .:.|    .|....:..|.:.:||:.:||..||..|...|::|.:.|.:|||..:||:.:||.||
Yeast   518 ISAECRLKSVPEMGYHADKDLKGELQIRGPQVFERYFKNPNETSKAVDQDGWFSTGDVAFIDGKG 582

  Fly   500 NLIISGRLKELIITAGGENIPPVHIEELIKKELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGI 564
            .:.:..|:|.....|.||.|.|..||.:.....|.::.:.:.||         .|||......|:
Yeast   583 RISVIDRVKNFFKLAHGEYIAPEKIENIYLSSCPYITQIFVFGD---------PLKTFLVGIVGV 638

  Fly   565 PLDALR-------EETIEWLRDLDIHETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAI 622
            .:||.:       .|...|.:::      |.|.||....|:                        
Yeast   639 DVDAAQPILAAKHPEVKTWTKEV------LVENLNRNKKLR------------------------ 673

  Fly   623 EEGIKRANKY--AISNAQKVQKFALIAHEFSVATGELGPTLKIRRNIVHAKYAKVIERLY 680
            :|.:.:.||.  .:...:|:....:.....::....:.||.||:|......:...:::||
Yeast   674 KEFLNKINKCTDGLQGFEKLHNIKVGLEPLTLEDDVVTPTFKIKRAKASKFFKDTLDQLY 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 144/643 (22%)
FAA2NP_010931.3 LC-FACS_euk 126..734 CDD:341250 146/645 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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