DRSC/TRiP Functional Genomics Resources

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Protein Alignment hll and acsl6

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_012814668.1 Gene:acsl6 / 779783 XenbaseID:XB-GENE-5834989 Length:731 Species:Xenopus tropicalis


Alignment Length:673 Identity:173/673 - (25%)
Similarity:274/673 - (40%) Gaps:97/673 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QTIPEFFKESCEKYSDLPALVWETPGS--GNDGWTTLTFGEYQERVEQAALMLLSVGVEERSS-- 96
            :|:.|.|:.......:.|.|     ||  .|..:..||:.|..:|.:.....||..|.:..|.  
 Frog   123 RTMYEVFQRGLHISENGPCL-----GSRKSNQPYEWLTYREVSDRAQCLGSGLLQQGCKSCSDQF 182

  Fly    97 VGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESSVCVVD--DAQQMAKLRAI 159
            :|:.|.|.|||..:|........||..:|.:....|:.:::.|.:.|..:.|  |...:......
 Frog   183 IGVFAQNRPEWIISELACYTYSMVVVPLYDTLGQGAIRYIINTADISTVICDKIDKANILLEHVE 247

  Fly   160 KERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLARESRIRANECAMLIFTS 224
            |...|.||:|: |..|.:|.: .|.|.....|:|......|:.:..|.........:.:::.|||
 Frog   248 KGETPGLKSVV-LMDPVDAQL-LERGRRCAVKIQTMQQVEEIGKRNLRPPLPPTPEDLSIVCFTS 310

  Fly   225 GTVGMPKAVMLSHDNLVFD-------TKSAAAHMQDIQVGKESFVSYLPLSHVAAQIFDVFLGLS 282
            ||.|.||..||:|.|:|.|       |:......||     :..:|:|||:|:..::....: ..
 Frog   311 GTTGNPKGAMLTHGNVVADFSGFLKVTEKVIFPTQD-----DVLISFLPLAHMFERVIQSVV-YC 369

  Fly   283 HAGCVTFADKD-ALKGTLIKTFRKARPTKMFGVPRVFEKLQERLVA-AEAKARPYSRLLLARARA 345
            |.|.:.|...| .|....:||.   |||....|||:..::.:::.: |:...:.:.....|:.:.
 Frog   370 HGGRIGFFQGDIRLLSDDMKTL---RPTIFPVVPRLLNRMYDKIFSQADTSIKRWILEFAAKRKE 431

  Fly   346 AVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDI 410
            |....          .:..|...|... :...::..:| ...|:..||.||.|..:..|   |..
 Frog   432 AEVRR----------GVIRNNSLWDRL-LFNKVQASLG-GRLRMIVTGAAPASPTVLGF---LRA 481

  Fly   411 ALG----ECYGMSETSGAITLNVD---ISNLYSAGQACEGVTL----KIHEPDCNGQGEILMRGR 464
            |||    |.||.:|.:...|....   .|....|...|..:.|    ::......|:|||.::|.
 Frog   482 ALGCQVYEGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNYIKLVDVVEMSYFAAKGEGEICVKGP 546

  Fly   465 LVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIK 529
            .||.|||....||.|.:.|:|||::||:|...|.|.|.|..|.|.:...|.||.|.|..||.:..
 Frog   547 NVFKGYLKDKVKTAEALDEEGWLYTGDVGKWLPSGTLKIIDRKKHIFKLAQGEYIAPEKIENIYI 611

  Fly   530 KELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPL-DALREETIEWLRDLDIHETRLSELLNI 593
            :..| ||.:.:.||..:...|            ||.: ||  |....|.:.....|         
 Frog   612 RSEP-VSQIYVHGDSLQAFLV------------GIVVPDA--EVMPAWAKKKGFDE--------- 652

  Fly   594 PADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYA-ISNAQKVQKFALIAHEFSVATGEL 657
                          :.:|:.....|.:||.|.:.|..|.: :.:.::|:...:....||:..|.|
 Frog   653 --------------SFMELCNNLDLKKAIMEDLLRLGKESGLHSFEQVKAIHIHTEMFSIQNGLL 703

  Fly   658 GPTLKIRRNIVHAKYAKVIERLY 680
            .||||.:|..:...:...||.||
 Frog   704 TPTLKAKRPELRDFFKLQIEELY 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 165/645 (26%)
acsl6XP_012814668.1 PLN02736 113..730 CDD:178337 173/673 (26%)
LC-FACS_euk 149..726 CDD:213293 163/640 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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