DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and acsl1a

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001027007.1 Gene:acsl1a / 555308 ZFINID:ZDB-GENE-050809-115 Length:697 Species:Danio rerio


Alignment Length:696 Identity:173/696 - (24%)
Similarity:291/696 - (41%) Gaps:146/696 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TIPEFFKESCEKYSDLPALVWETPGSGNDG----WTTLTFGEYQERVEQAALMLLSVGVEERSS- 96
            |:.|||.......::.|.|     ||...|    |  |::.|..:|.|.|...||..|..:... 
Zfish    91 TLYEFFLRGLRVPNNGPCL-----GSRKAGQPYKW--LSYKEVADRAEFAGSALLHRGHSQSGDK 148

  Fly    97 -VGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVL--ATGESSVCVVDDAQQMAKLRA 158
             :||.|.|.|||..:|........|...:|.:...||:.:|:  |:..:.:|.:.|..::. |..
Zfish   149 YIGIFAQNRPEWTISELACYTYSLVAVPLYDTLGTEAISYVIDKASITTIICDIADKARLI-LDC 212

  Fly   159 IKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEE----------LLARESRIR 213
            :..|...:..::.:                      ::|.|||..:          |...|:..:
Zfish   213 VSGRKHSVTTIVIM----------------------ESFDSELTAQAQNCGIDIISLKELEAIGK 255

  Fly   214 AN----------ECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQV-----GKESFVS 263
            ||          :.|::.|||||.|.||..||:|.|:|   .:.:|.::..:|     ..:..:|
Zfish   256 ANHKTPIPPKPEDLALICFTSGTTGNPKGAMLTHGNVV---SNCSAFIKITEVHCMLNQTDIHIS 317

  Fly   264 YLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQERLVAA 328
            ||||:|:..::.:..| |.|...:.:...|.  ..|:...:..:||....|||:..::.:: :..
Zfish   318 YLPLAHMFERVVEGVL-LCHGAKIGYFQGDI--RLLMDDLKNLKPTIFPVVPRLLNRMFDK-IFG 378

  Fly   329 EAKARPYSRLLLARARAAVAEHQTTLMAG--KSPSIYGNAKYWLACRVVKPIREMIGVDNCRVFF 391
            :|.. |..|.||   ..|.:..:..|.:|  :..|::...       :...::..:| ...|:..
Zfish   379 QANT-PLKRWLL---DFATSRKEAELKSGVVRKDSMWDKL-------IFSKVQASLG-GRVRLMI 431

  Fly   392 TGGAPTSEELKQFFLGLDIALG----ECYGMSETSGAITLNVDISNLYSAGQA-----CEGVTL- 446
            ||.||.|..:..|   |..|||    |.||.:|.:...|::  :...::||..     |..|.| 
Zfish   432 TGAAPVSPTVLTF---LRAALGCQFYEGYGQTECTAGCTMS--LPGDWTAGHVGAPLPCNFVKLV 491

  Fly   447 ---KIHEPDCNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLK 508
               :::....||:||:.::|..||.|||..|::|...|.:.||||:||:|...|.|.|.|..|.|
Zfish   492 DVAEMNYFAANGEGEVCVKGPNVFQGYLKDPEQTSGAVDKAGWLHTGDIGKWLPNGTLKIIDRKK 556

  Fly   509 ELIITAGGENIPPVHIEELIKKELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPLDALREET 573
            .:...|.||.|.|..||.:..:..| |:.|.:.||         ||:. |.....:|        
Zfish   557 HIFKLAQGEYIAPEKIENIYIRSDP-VAQVFVHGD---------SLQA-CLVGVVVP-------- 602

  Fly   574 IEWLRDLDIHETRLSELLNIPADLQLPN--DTAALAATLEITAKPKLLE--AIEEGIKRANKYAI 634
                 |.|.                ||.  ....:..:.....|.|.::  .:|:.|:...:..:
Zfish   603 -----DPDF----------------LPGWAKNRGIEGSFNDLCKSKEVKNAILEDMIQLGKEAGL 646

  Fly   635 SNAQKVQKFALIAHEFSVATGELGPTLKIRRNIVHAKYAKVIERLY 680
            .:.::|:..||....|||..|.|.||||.:|..:.:::.:.|::||
Zfish   647 KSFEQVRDIALHLEMFSVQNGLLTPTLKAKRTELKSRFREQIDQLY 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 164/669 (25%)
acsl1aNP_001027007.1 PLN02736 88..695 CDD:178337 173/696 (25%)
LC-FACS_euk 116..692 CDD:213293 162/664 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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