DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and Acsl4

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_997508.1 Gene:Acsl4 / 50790 MGIID:1354713 Length:711 Species:Mus musculus


Alignment Length:758 Identity:169/758 - (22%)
Similarity:314/758 - (41%) Gaps:185/758 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPATSYRSTSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPAL-------------- 55
            ||.:.|||.:..|::.: :|.|.:       .|:.:.|..:..|:....:|              
Mouse    54 KPGSPYRSVTHFDSLAV-IDIPGA-------DTLDKLFDHAVAKFGKKDSLGTREILSEENEMQP 110

  Fly    56 ---VWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRA 117
               |::....||..|  :.:.|...||......|.::|::.::::.|......||..|.....:.
Mouse   111 NGKVFKKLILGNYKW--INYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKY 173

  Fly   118 GAVVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDH 182
            ...:..:|.:...|||.|.|...|:|..:.......:||:|....:..:|.:|        :||:
Mouse   174 NFPLVTLYATLGREAVVHGLNESEASYLITSVELLESKLKAALVDINCVKHII--------YVDN 230

  Fly   183 E-------PGYFSWQKLQEQTFSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNL 240
            :       |.......:|.........|.|....||...::.|::::|||:.|.||.||:.|.||
Mouse   231 KTINRAEYPEGLEIHSMQSVEELGAKPENLSVPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNL 295

  Fly   241 VFDTKSAAAHMQDIQVGKESFVSYLPLSHV---AAQI--FDVFLGLSHAGCVTFAD-----KDAL 295
            :.........:..:. .|::::.||||:||   .|:|  |.....:.::..:|.:|     |...
Mouse   296 IAGMTGQCERIPGLG-PKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGS 359

  Fly   296 KG--TLIKTFRKARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEHQTTLMAGK 358
            ||  |::|      ||.|..||.:.:::.:. |.::.:...|.:             :|....|.
Mouse   360 KGDCTVLK------PTLMAAVPEIMDRIYKN-VMSKVQEMNYVQ-------------KTLFKIGY 404

  Fly   359 SPSIYGNAKYWLA--CRVV--KPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIA----LGEC 415
            ...:....|.:.|  |.::  |.::.::| .|.|:..:||||.|.:..:|   :::.    :|:.
Mouse   405 DYKLEQIKKGYDAPLCNLILFKKVKALLG-GNVRMMLSGGAPLSPQTHRF---MNVCFCCPIGQG 465

  Fly   416 YGMSETSGAITLNVDISNLYSAGQ------ACEGVTLK--------IHEPDCNGQGEILMRGRLV 466
            ||::|:.||.|: .:::: |:.|:      .|| :.||        :|:.. |.:|||::.|:.:
Mouse   466 YGLTESCGAGTV-TEVTD-YTTGRVGAPLICCE-IKLKDWQEGGYTVHDKP-NPRGEIVIGGQNI 526

  Fly   467 FMGYLGLPDKTEE--TVKEDG--WLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEEL 527
            .|||....:||.|  .|.|:|  |..:||:|...|.|.|.|..|.|:|:....||.:....:|..
Mouse   527 SMGYFKNEEKTAEDYCVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAA 591

  Fly   528 IKKELPCVSNVL------------LIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIE--WLR 578
            : |..|.:.|:.            .:..::|.||:|                 .:::.:|  |: 
Mouse   592 L-KNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLL-----------------AQQKGVEGSWV- 637

  Fly   579 DLDIHETRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKF 643
                      ::.|.||                  .:.::|:.|.|.         :||.|:::|
Mouse   638 ----------DICNNPA------------------MEAEILKEIREA---------ANAMKLERF 665

  Fly   644 ------ALIAHEFSVATGELGPTLKIRRNIVHAKYAKVIERLY 680
                  .|....::..||.:....|::|..:...|.|.|||:|
Mouse   666 EIPIKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLKDIERMY 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 155/682 (23%)
Acsl4NP_997508.1 LC_FACS_euk1 121..696 CDD:341294 150/669 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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