DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and acsl5

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001004599.2 Gene:acsl5 / 447860 ZFINID:ZDB-GENE-040912-169 Length:681 Species:Danio rerio


Alignment Length:676 Identity:181/676 - (26%)
Similarity:287/676 - (42%) Gaps:103/676 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVE--ERSSVG 98
            :|:.|.|:.......:.|.|.:...|.... |  |.:.:..:|.|.....|:..|.:  :.:.:|
Zfish    75 KTLYEVFQRGLRVSGNGPCLGFRKKGQPYQ-W--LKYKQVSDRAEFLGSGLIHRGQKPSQDTFIG 136

  Fly    99 ILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQMAKL--RAIKE 161
            |.|.|.|||..||........|...:|.:...||:..::.....|..:.|...:...|  .:.|:
Zfish   137 IFAQNRPEWIIAELACYTYSMVAVPLYDTLGPEALVFIINRANISTVICDKKDKAETLLDNSEKK 201

  Fly   162 RLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKE-ELLARESRIR-----ANECAML 220
            ..|.||.:|.:.....|..:.      ..|:.....|  ||: |.|.:.:..|     ..:.:::
Zfish   202 LTPLLKTIILMDSYDSALTER------GSKIGLDVLS--LKDVEALGKNNHHRPVPPKPEDLSII 258

  Fly   221 IFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQD--IQVGKESFVSYLPLSHVAAQIFD-VFLGLS 282
            .|||||.|.||..||:|:|:|.|........:.  :.|..:..:|:|||:|:..::.. |..|: 
Zfish   259 CFTSGTTGDPKGAMLTHENVVADAAGVVRTFESVFVPVPSDVSISFLPLAHMFERVVQTVLYGV- 322

  Fly   283 HAGCVTFADKDALKGTLIKTFRKA-RPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAA 346
             .|.|.|...|.   .|:....|| :||....|||:..::.:: |.:.||. |:.:.||   ..|
Zfish   323 -GGRVGFFQGDI---RLLPDDMKALQPTVFPVVPRLLNRVYDK-VQSGAKT-PFKKWLL---NFA 378

  Fly   347 VAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNCRVFFTGGAPTSEELKQFF---LGL 408
            :.:....:..|    |..|...|... :...::|.:| ...||..||.||.|..:..|.   ||.
Zfish   379 IEKKCAEVKQG----IIRNDSMWDKL-IFHKVQESLG-GRVRVMVTGAAPISPSVLTFLRACLGC 437

  Fly   409 DIALGECYGMSETSGAITLNVDISNLYSAGQA-----CEGVTL-KIHEPD---CNGQGEILMRGR 464
            .|.  |.||.:|.:.|.:..  |...:..|..     |..:.| .:.|.|   .||:|||.::|.
Zfish   438 QIF--EAYGQTECTAACSFT--IPGDWKTGHVGAPIPCNTIKLVDVEEMDYFASNGEGEICVKGT 498

  Fly   465 LVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIK 529
            .||.||||.|:||.|.:.:|||||:||:|...|.|.|.|..|.|.:...|.||.|.|..||.:..
Zfish   499 NVFRGYLGDPEKTAEALDKDGWLHTGDIGKWLPSGVLKIIDRKKNIFKLAQGEYIAPEKIENVYI 563

  Fly   530 KELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRDLDIHETRLSELLNIP 594
            :..| |:.|.:.|:         ||::...|                              :.:|
Zfish   564 RSAP-VAQVFVHGE---------SLQSSLVA------------------------------IVVP 588

  Fly   595 ADLQLPN--DTAALAATL-EITAKPKLLEAIEEGIKRANKYA-ISNAQKVQKFALIAHEFSVATG 655
            ....||.  :...|..:| |:....:|.:||...:.:..:.| :.:.::|:...|....|::..|
Zfish   589 DPEVLPGFAEKLGLKGSLEELCRNQELKKAIISDLNKLGREAGLKSFEQVKDLYLHPDMFTIENG 653

  Fly   656 ELGPTLKIRRNIVHAKYAKV-IERLY 680
            .|.||||.:|..: .||.:| ||.||
Zfish   654 LLTPTLKAKRADL-TKYFRVQIESLY 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 173/648 (27%)
acsl5NP_001004599.2 PLN02736 75..679 CDD:178337 181/676 (27%)
LC-FACS_euk 101..678 CDD:213293 173/648 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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