DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hll and CG11659

DIOPT Version :9

Sequence 1:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_650829.1 Gene:CG11659 / 42352 FlyBaseID:FBgn0038731 Length:546 Species:Drosophila melanogaster


Alignment Length:584 Identity:126/584 - (21%)
Similarity:208/584 - (35%) Gaps:156/584 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PPQTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSSVG 98
            |..:|.|.......::..|.|.:..|.|      |.||.||......:.|..:.|:|:.:...||
  Fly    27 PDLSIGEIIFHEMRRHPQLTAQISATEG------TVLTRGELLANAMRLASYMRSLGLLQSDIVG 85

  Fly    99 ILAFNCPEWFFAEFGALRAGAVVAGV---YPSNSAEAVHHVLATGESSV-CVVDDAQQMAKLRAI 159
            ::..|........:.....|.....:   |..::.|.::.|  |..|.: |   |..:..|:|:.
  Fly    86 LIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKV--TRPSIIFC---DGDEFEKVRSA 145

  Fly   160 KERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLARESRIRANECAMLIFTS 224
            ...|. :|.|...:.|.::.           |:.| ..::.::|.....:.....::...::.:|
  Fly   146 TAELD-VKIVTMRNHPLDSI-----------KIDE-VVATPIEENFQPAKLEKGNDQTLAILCSS 197

  Fly   225 GTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGKESFVSYLPLSHVAAQIFDVFLGLSHAGCVTF 289
            ||.|.||||.:::..                             |:.|       |..|   :|.
  Fly   198 GTTGTPKAVTITNSR-----------------------------HILA-------GNYH---LTT 223

  Fly   290 ADKDALKGTL--IKTFRKARPTKMFGVPRVFEKLQERLVAAEAKARPYSRLLLARARAAVAEHQT 352
            ||......||  |........:.:|...|:.         |:....|      |.|...:.|::.
  Fly   224 ADVQYSHNTLDWITGLLTTITSGVFSTTRII---------ADNAFDP------AFALRIIEEYKV 273

  Fly   353 TLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDNC-----------RVFFTGGAPTSEELKQFFL 406
            |               |    .::|...|..:.||           |.:..||:..:.|:::   
  Fly   274 T---------------W----TIQPPSSMALMINCPDFETCDLSSLRCYMFGGSRAALEVQK--- 316

  Fly   407 GLDIALG-EC----YGMSETSGAITLNVDI-SNLYSAGQACEGVTLKIHEPDCNGQ-------GE 458
            |:...|. .|    ||.:|.....|:|... ....|.||...|:.:||...|  |:       ||
  Fly   317 GIRSRLSHNCLQFVYGFTELGAMATINCHFDEKTGSVGQLVNGLKMKIKNDD--GESLGPDEIGE 379

  Fly   459 ILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIP--P 521
            :.:.....:.||.|...:|.......||.|||||||:|..|.|.|..|.||::   ..:||.  |
  Fly   380 VCIMNNQHWSGYYGNEVETRNMRDSLGWYHSGDLGYMDRDGFLYIMDRKKEML---KYQNIMYYP 441

  Fly   522 VHIEELIKKELPCVSNVL-------LIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLR 578
            ..||.:| .|:|.|:.|.       :.||......|         .|.|..|:|  ::.::::|
  Fly   442 NDIESVI-SEMPQVAEVCVFGIWSNIFGDEAAAAVV---------KKLGSELEA--QDVVDYVR 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 119/556 (21%)
CG11659NP_650829.1 CaiC 26..523 CDD:223395 126/584 (22%)
AFD_class_I 47..522 CDD:302604 122/564 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452217
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.